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Os04g0644600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Epoxide hydrolase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.2 (0.0322) R2 : 0.927
β1 : -2.24 (0.119) R2dD : 0.0622 R2D : 0.0617
β2 : 5.86 (0.0826) R2dC : 0.905 R2C : 0.75
β3 : 2.63 (0.157) R2dE : 0.0562 R2E : -0.0481
β4 : 3.52 (0.316) R2dD*C : 0.0199 R2D*C : 0.0137
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.652 (0.071) R2dN8 : 0.02 R2N8 : 0.0124
σ : 0.591
deviance : 161.24
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C
peak time of C : 9.24
E
wheather : temperature
threshold : 25.15
memory length : 600
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 10.1
open length of G : 8.4

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
159.98 0.594 11.2 -2.07 5.87 2.53 3.04 -1.05 -0.622 9.25 25.25 619 10.1 8.24
161.24 0.591 11.2 -2.24 5.86 2.63 3.52 -- -0.652 9.24 25.15 600 10.1 8.4
181.82 0.628 11.2 -1.65 6.07 2.75 -- -3.48 -0.612 9.3 25.2 583 10.9 8.4
202.77 0.663 11.2 -2.07 5.87 2.67 -- -- -0.644 9.23 25.21 622 10.2 7.92
1932.24 2.06 11.4 -2.57 -- 1.3 -- 0.989 -0.861 -- 25.2 583 10.9 8.4
257.48 0.752 11.3 -2.68 5.39 -- 3.93 -- -1.03 9.35 -- -- -- --
313.36 0.829 11.3 -2.54 5.37 -- -- -- -1.02 9.36 -- -- -- --
1936.68 2.06 11.4 -2.44 -- 1.28 -- -- -0.834 -- 25.21 622 10.2 7.92
297.07 0.803 11.2 -- 6.07 2.92 -- -- -0.336 9.15 26.35 642 10.2 7.43
1998.78 2.09 11.5 -2.56 -- -- -- -- -1 -- -- -- -- --
482.76 1.03 11.3 -- 5.37 -- -- -- -0.742 9.4 -- -- -- --
1988.97 2.08 11.2 -- -- 2.76 -- -- -0.169 -- 22.2 5872 10.2 7.57
2172.16 2.18 11.4 -- -- -- -- -- -0.72 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 163.91 temperature 30 720 < th dose dependent rect. 11 4
2 164.98 temperature 30 720 < th dose dependent rect. 12 1
4 165.60 temperature 25 720 < th dose independent rect. 10 8
5 166.02 temperature 30 720 < th dose dependent rect. 10 8
11 167.58 temperature 25 720 > th dose independent rect. 9 9
14 168.77 temperature 25 270 < th dose dependent rect. 12 10
46 174.05 temperature 15 270 > th dose dependent rect. 16 9
58 174.73 temperature 25 720 > th dose independent rect. 14 4
90 177.24 temperature 25 10 < th dose dependent sin 16 NA
103 177.80 temperature 25 90 < th dose dependent sin 17 NA
105 177.94 temperature 30 270 < th dose dependent rect. 12 17
139 180.33 temperature 25 720 < th dose dependent rect. 15 3
140 180.34 temperature 25 720 < th dose independent sin 23 NA
171 181.80 temperature 25 10 < th dose dependent rect. 13 11
222 183.75 temperature 25 720 > th dose independent sin 23 NA
226 183.84 temperature 10 30 > th dose dependent sin 14 NA
233 184.11 temperature 25 720 < th dose independent rect. 12 1
234 184.18 temperature 10 270 > th dose dependent sin 16 NA
242 184.46 temperature 30 720 < th dose dependent sin 22 NA
273 185.18 temperature 25 720 < th dose dependent rect. 17 1
294 185.93 temperature 15 10 > th dose dependent rect. 16 12
324 186.70 temperature 25 720 < th dose independent rect. 15 2
326 186.73 temperature 15 720 > th dose dependent rect. 13 6
374 187.74 temperature 20 720 > th dose dependent rect. 14 3
515 190.76 temperature 20 270 > th dose independent rect. 16 10
535 191.16 temperature 20 720 > th dose dependent rect. 9 8
551 191.47 temperature 20 720 > th dose dependent rect. 9 10
578 191.88 temperature 20 10 > th dose independent rect. 18 10
634 192.83 temperature 20 10 > th dose independent rect. 16 12
640 192.89 temperature 10 720 > th dose dependent rect. 9 8
666 193.51 temperature 15 10 > th dose dependent rect. 18 10
673 193.74 temperature 15 270 > th dose dependent rect. 7 17
729 194.73 temperature 10 720 > th dose dependent sin 20 NA
774 195.50 temperature 20 720 > th dose dependent sin 21 NA
825 196.30 temperature 25 270 < th dose independent sin 18 NA
878 197.10 temperature 10 720 > th dose dependent rect. 9 14
972 198.55 temperature 25 270 > th dose independent sin 18 NA