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Os04g0635500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Wound induced protein (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.6 (0.0514) R2 : 0.667
β1 : 0.212 (0.209) R2dD : 0.000927 R2D : 0.00768
β2 : 2.29 (0.119) R2dC : 0.268 R2C : 0.3
β3 : 2.33 (0.149) R2dE : 0.205 R2E : 0.314
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -3.01 (0.499) R2dD*E : 0.036 R2D*E : 0.0904
γ1 : 0.644 (0.112) R2dN8 : 0.0367 R2N8 : 0.0674
σ : 0.931
deviance : 399.23
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C
peak time of C : 1.21
E
wheather : temperature
threshold : 20.65
memory length : 291
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 15.2
open length of G : 21.5

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
391.41 0.93 10.6 0.137 2.29 2.32 -1.42 -3.13 0.64 1.26 20.6 288 15.2 21.6
423.59 0.959 10.5 0.773 2.35 2.38 -0.822 -- 0.696 1.27 20.95 298 15 21.6
399.23 0.931 10.6 0.212 2.29 2.33 -- -3.01 0.644 1.21 20.65 291 15.2 21.5
426.09 0.961 10.5 0.784 2.34 2.41 -- -- 0.702 1.33 20.94 301 15 21.5
470.19 1.01 10.6 -0.227 -- 3.64 -- -2.57 0.533 -- 19.55 464 13.4 18.9
667.51 1.21 10.4 1.42 2.44 -- -1.19 -- 1.23 1.83 -- -- -- --
673.05 1.21 10.4 1.46 2.43 -- -- -- 1.24 1.82 -- -- -- --
479.19 1.02 10.5 0.433 -- 3.63 -- -- 0.639 -- 19.5 430 13.5 19.1
440.09 0.977 10.5 -- 2.34 2.5 -- -- 0.674 1.33 20.9 306 14.9 21.6
1032.31 1.5 10.3 1.56 -- -- -- -- 1.29 -- -- -- -- --
729.24 1.26 10.4 -- 2.46 -- -- -- 1.08 1.83 -- -- -- --
483.44 1.02 10.5 -- -- 3.74 -- -- 0.58 -- 19.5 426 13.6 19.2
1096.49 1.55 10.4 -- -- -- -- -- 1.12 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 417.18 temperature 20 270 > th dose independent rect. 15 22
4 427.95 temperature 25 270 < th dose dependent rect. 20 21
35 442.95 temperature 20 270 < th dose independent rect. 21 20
46 446.45 temperature 15 270 > th dose dependent rect. 15 22
52 446.96 temperature 20 720 > th dose independent rect. 8 21
54 447.14 temperature 20 90 > th dose independent rect. 18 21
59 448.35 temperature 30 10 < th dose dependent rect. 20 22
87 450.89 temperature 25 720 < th dose dependent rect. 15 17
103 452.30 temperature 20 1440 < th dose independent rect. 22 15
120 453.01 temperature 25 270 < th dose dependent rect. 11 23
132 453.52 temperature 20 1440 > th dose independent rect. 22 15
140 453.77 temperature 20 270 > th dose independent rect. 21 23
149 454.13 temperature 25 270 < th dose dependent no NA NA
154 454.24 temperature 20 1440 < th dose independent rect. 5 2
188 455.14 temperature 15 270 > th dose dependent sin 9 NA
197 455.39 temperature 25 720 < th dose dependent rect. 11 21
202 455.62 radiation 10 4320 < th dose dependent rect. 21 8
203 455.68 temperature 25 270 < th dose dependent sin 9 NA
208 455.85 temperature 20 270 < th dose independent rect. 21 14
219 456.14 temperature 20 1440 < th dose independent rect. 1 10
226 456.26 temperature 20 1440 < th dose independent sin 6 NA
239 456.48 temperature 25 720 < th dose dependent sin 12 NA
253 456.73 temperature 20 1440 < th dose independent rect. 3 7
261 456.86 temperature 25 720 < th dose dependent rect. 3 22
280 457.29 temperature 20 1440 > th dose independent sin 6 NA
282 457.38 temperature 20 4320 > th dose independent rect. 18 5
283 457.43 temperature 20 1440 > th dose independent rect. 5 2
299 457.82 temperature 20 1440 > th dose independent rect. 1 10
304 458.00 temperature 20 270 > th dose independent rect. 23 12
305 458.03 temperature 25 1440 < th dose dependent rect. 2 9
316 458.36 temperature 20 720 < th dose independent rect. 17 21
338 458.66 temperature 20 270 > th dose independent sin 8 NA
344 458.70 temperature 20 1440 > th dose independent rect. 3 7
350 458.89 radiation 1 14400 < th dose dependent rect. 7 1
361 459.09 temperature 20 4320 < th dose independent rect. 18 5
368 459.24 temperature 20 720 > th dose independent rect. 16 13
428 460.06 radiation 1 14400 < th dose independent rect. 7 1
450 460.35 radiation 1 14400 > th dose independent rect. 7 1
471 460.76 wind 7 43200 > th dose dependent rect. 10 2
484 461.06 wind 7 43200 > th dose dependent rect. 9 4
503 461.36 temperature 25 1440 < th dose dependent sin 7 NA
507 461.41 humidity 90 14400 > th dose dependent rect. 1 14
521 461.55 humidity 90 14400 > th dose dependent rect. 5 1
535 461.69 humidity 90 14400 > th dose dependent rect. 2 12
600 462.56 humidity 80 43200 > th dose independent rect. 6 1
612 462.71 wind 9 43200 < th dose independent rect. 22 17
634 462.99 wind 9 43200 > th dose independent rect. 22 17
640 463.06 radiation 20 43200 < th dose independent rect. 21 9
649 463.13 wind 9 43200 > th dose independent rect. 19 20
650 463.14 temperature 20 720 > th dose independent no NA NA
654 463.21 wind 9 43200 > th dose independent rect. 10 2
663 463.28 wind 9 43200 > th dose independent rect. 4 11
677 463.35 temperature 20 720 < th dose independent rect. 3 23
681 463.40 wind 9 43200 > th dose independent rect. 24 15
697 463.55 wind 9 43200 < th dose independent rect. 4 11
699 463.56 wind 9 43200 > th dose independent rect. 2 13
702 463.58 wind 9 43200 < th dose independent rect. 10 2
710 463.66 temperature 20 270 < th dose independent no NA NA
711 463.66 wind 9 43200 < th dose independent rect. 19 20
720 463.76 wind 9 43200 < th dose independent rect. 2 13
722 463.77 temperature 20 1440 < th dose independent rect. 22 2
728 463.82 wind 7 43200 > th dose dependent rect. 8 6
731 463.83 temperature 20 720 < th dose independent rect. 1 23
739 463.88 humidity 90 14400 > th dose dependent sin 5 NA
751 463.96 temperature 20 1440 < th dose dependent rect. 4 1
758 464.01 wind 9 43200 > th dose independent rect. 9 4
768 464.08 atmosphere 1015 43200 < th dose independent rect. 12 8
776 464.13 temperature 20 720 < th dose independent rect. 9 23
802 464.46 wind 7 43200 > th dose independent rect. 7 5
805 464.48 wind 9 43200 < th dose independent rect. 9 4
807 464.49 radiation 20 14400 < th dose independent rect. 19 11
817 464.57 temperature 20 1440 > th dose independent rect. 22 2
831 464.72 humidity 80 43200 < th dose independent rect. 6 1
839 464.80 wind 9 43200 < th dose independent sin 3 NA
844 464.81 wind 7 43200 > th dose dependent rect. 5 9
848 464.83 atmosphere 1015 43200 > th dose independent rect. 12 8
861 464.95 temperature 20 270 < th dose independent sin 8 NA
863 464.96 wind 7 43200 > th dose dependent rect. 4 11
867 464.99 atmosphere 1015 43200 < th dose independent rect. 12 1
882 465.07 wind 7 43200 > th dose dependent rect. 21 18
896 465.15 wind 7 43200 < th dose independent rect. 6 6
906 465.20 atmosphere 1015 43200 < th dose independent rect. 18 2
915 465.28 wind 7 43200 > th dose dependent sin 3 NA
926 465.36 atmosphere 1015 43200 > th dose independent rect. 12 1
932 465.38 wind 9 43200 > th dose independent sin 3 NA
989 465.70 radiation 1 14400 > th dose independent rect. 10 2