Os04g0619500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ovarian tumour, otubain domain containing protein.
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Os04g0619500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ovarian tumour, otubain domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.49 | 0.268 | 12.5 | -0.813 | 0.392 | -0.577 | -0.1 | 0.364 | -0.275 | 2.82 | 26.6 | 3824 | -- | -- |
| 32.62 | 0.266 | 12.4 | -0.74 | 0.391 | -0.614 | -0.13 | -- | -0.26 | 2.83 | 26.3 | 3848 | -- | -- |
| 32.52 | 0.266 | 12.5 | -0.812 | 0.39 | -0.576 | -- | 0.373 | -0.274 | 2.77 | 26.6 | 3845 | -- | -- |
| 32.66 | 0.266 | 12.4 | -0.739 | 0.39 | -0.615 | -- | -- | -0.259 | 2.76 | 26.1 | 3866 | -- | -- |
| 41.18 | 0.299 | 12.5 | -0.814 | -- | -0.651 | -- | 0.321 | -0.283 | -- | 27.39 | 3925 | -- | -- |
| 38.9 | 0.292 | 12.4 | -0.449 | 0.429 | -- | -0.124 | -- | -0.103 | 2.62 | -- | -- | -- | -- |
| 38.95 | 0.292 | 12.4 | -0.446 | 0.428 | -- | -- | -- | -0.103 | 2.58 | -- | -- | -- | -- |
| 41.26 | 0.299 | 12.4 | -0.763 | -- | -0.695 | -- | -- | -0.267 | -- | 26.71 | 3927 | -- | -- |
| 42.63 | 0.304 | 12.4 | -- | 0.418 | -0.3 | -- | -- | -0.111 | 2.6 | 26.6 | 1688 | -- | -- |
| 49.68 | 0.329 | 12.4 | -0.427 | -- | -- | -- | -- | -0.0919 | -- | -- | -- | -- | -- |
| 44.19 | 0.311 | 12.4 | -- | 0.419 | -- | -- | -- | -0.053 | 2.56 | -- | -- | -- | -- |
| 51.08 | 0.333 | 12.4 | -- | -- | -0.437 | -- | -- | -0.128 | -- | 27.7 | 1093 | -- | -- |
| 54.5 | 0.345 | 12.4 | -- | -- | -- | -- | -- | -0.0445 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.33 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 2 | 31.37 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 3 | 31.41 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 7 | 31.50 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 12 | 31.77 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 16 | 31.85 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 18 | 31.87 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 21 | 31.89 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 5 | 12 |
| 35 | 31.90 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 5 | 12 |
| 52 | 31.90 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 61 | 31.92 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 21 | 12 |
| 71 | 31.93 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 21 | 12 |
| 73 | 31.94 | radiation | 1.0 | 14400 | > th | dose independent | sin | 3 | NA |
| 75 | 31.94 | radiation | 1.0 | 14400 | < th | dose independent | sin | 3 | NA |
| 78 | 31.94 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 93 | 31.95 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 94 | 31.95 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 23 | 10 |
| 124 | 31.96 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 155 | 31.98 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 169 | 31.98 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 21 | 12 |
| 283 | 32.02 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 10 | 22 |
| 285 | 32.02 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 10 | 22 |
| 289 | 32.02 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 292 | 32.03 | radiation | 1.0 | 14400 | > th | dose independent | no | NA | NA |
| 294 | 32.03 | radiation | 1.0 | 14400 | < th | dose independent | no | NA | NA |
| 320 | 32.03 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 15 | 17 |
| 326 | 32.03 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 15 | 17 |
| 379 | 32.03 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 14 | 21 |
| 388 | 32.03 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 14 | 22 |
| 483 | 32.04 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 484 | 32.04 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 5 |
| 597 | 32.08 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 23 | 1 |
| 600 | 32.08 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 5 |
| 601 | 32.08 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 5 |
| 615 | 32.08 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 5 |
| 616 | 32.08 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 24 | 7 |
| 690 | 32.13 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 16 | 21 |
| 704 | 32.14 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 13 |
| 716 | 32.16 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 723 | 32.16 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 17 |
| 731 | 32.17 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 18 | 8 |
| 776 | 32.20 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 8 |
| 788 | 32.21 | wind | 9.0 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 791 | 32.21 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 10 | 9 |
| 826 | 32.22 | radiation | 1.0 | 14400 | < th | dose dependent | sin | 4 | NA |
| 840 | 32.23 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 859 | 32.23 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 867 | 32.24 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 879 | 32.24 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 880 | 32.24 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 24 | 13 |
| 925 | 32.26 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 926 | 32.26 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 967 | 32.26 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 3 |
| 985 | 32.27 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 986 | 32.27 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 11 | 1 |