Os04g0592600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0592600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70.53 | 0.395 | 12 | -1.63 | 0.79 | -0.0742 | 0.604 | 3.05 | -0.134 | 1.23 | 25.2 | 104 | -- | -- |
| 76.47 | 0.407 | 11.9 | -1.22 | 0.863 | -1.12 | 1.5 | -- | -0.0571 | 1.15 | 19.57 | 246 | -- | -- |
| 71.48 | 0.394 | 12 | -1.63 | 0.798 | -0.0379 | -- | 3.28 | -0.124 | 1.09 | 25.4 | 61 | -- | -- |
| 83.9 | 0.427 | 11.9 | -1.34 | 0.814 | -1.42 | -- | -- | -0.0537 | 1.21 | 19.4 | 233 | -- | -- |
| 95.14 | 0.454 | 11.9 | -1.57 | -- | 0.815 | -- | 4.25 | -0.0139 | -- | 31.37 | 4 | -- | -- |
| 83.94 | 0.43 | 11.9 | -1.07 | 0.778 | -- | 1.54 | -- | 0.0263 | 1.43 | -- | -- | -- | -- |
| 93.34 | 0.452 | 11.9 | -1.12 | 0.776 | -- | -- | -- | 0.0188 | 1.13 | -- | -- | -- | -- |
| 117 | 0.504 | 11.9 | -0.911 | -- | 0.975 | -- | -- | 0.165 | -- | 35.47 | 2 | -- | -- |
| 124.36 | 0.519 | 11.9 | -- | 0.768 | -0.952 | -- | -- | 0.136 | 1.05 | 15.03 | 109 | -- | -- |
| 130.69 | 0.534 | 11.9 | -1.09 | -- | -- | -- | -- | 0.0343 | -- | -- | -- | -- | -- |
| 126.27 | 0.526 | 11.9 | -- | 0.757 | -- | -- | -- | 0.143 | 1.07 | -- | -- | -- | -- |
| 137.64 | 0.546 | 11.8 | -- | -- | 1.26 | -- | -- | 0.298 | -- | 50.46 | 2 | -- | -- |
| 161.91 | 0.594 | 11.9 | -- | -- | -- | -- | -- | 0.155 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 69.37 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 18 |
| 2 | 69.52 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 3 | 69.65 | wind | 1 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 6 | 69.82 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 22 |
| 21 | 70.11 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 22 |
| 26 | 70.17 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 20 |
| 38 | 70.28 | temperature | 10 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 40 | 70.30 | wind | 1 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 43 | 70.31 | temperature | 25 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 67 | 70.48 | temperature | 10 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 70 | 70.50 | temperature | 15 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 82 | 70.56 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 92 | 70.61 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 109 | 70.71 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 113 | 70.75 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 120 | 70.78 | temperature | 10 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 125 | 70.82 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 162 | 70.96 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 163 | 70.96 | temperature | 25 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 203 | 71.14 | humidity | 80 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 205 | 71.14 | temperature | 15 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 222 | 71.21 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 239 | 71.30 | temperature | 10 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 251 | 71.34 | temperature | 15 | 30 | > th | dose dependent | rect. | 15 | 23 |
| 276 | 71.45 | humidity | 90 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 308 | 71.57 | radiation | 20 | 4320 | < th | dose independent | rect. | 18 | 12 |
| 334 | 71.66 | temperature | 15 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 375 | 71.85 | wind | 3 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 394 | 71.94 | humidity | 70 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 414 | 71.98 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 18 |
| 438 | 72.06 | humidity | 60 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 451 | 72.09 | humidity | 60 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 455 | 72.12 | humidity | 60 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 482 | 72.21 | humidity | 70 | 43200 | < th | dose dependent | rect. | 5 | 4 |
| 489 | 72.23 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 490 | 72.23 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 493 | 72.24 | humidity | 60 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 494 | 72.24 | humidity | 70 | 43200 | > th | dose independent | rect. | 3 | 5 |
| 505 | 72.26 | humidity | 60 | 43200 | < th | dose dependent | rect. | 9 | 3 |
| 510 | 72.27 | humidity | 60 | 43200 | < th | dose dependent | rect. | 5 | 7 |
| 563 | 72.38 | humidity | 50 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 568 | 72.39 | humidity | 90 | 720 | > th | dose dependent | sin | 22 | NA |
| 587 | 72.42 | humidity | 50 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 594 | 72.43 | humidity | 50 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 601 | 72.44 | radiation | 40 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 613 | 72.44 | humidity | 70 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 622 | 72.44 | radiation | 40 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 625 | 72.44 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 3 |
| 639 | 72.44 | wind | 1 | 43200 | < th | dose dependent | rect. | 9 | 15 |
| 656 | 72.47 | temperature | 15 | 30 | > th | dose dependent | rect. | 17 | 23 |
| 670 | 72.51 | wind | 1 | 43200 | < th | dose independent | rect. | 8 | 16 |
| 709 | 72.59 | temperature | 25 | 720 | < th | dose dependent | sin | 16 | NA |
| 746 | 72.64 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 15 |
| 789 | 72.70 | humidity | 80 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 792 | 72.70 | wind | 1 | 43200 | < th | dose dependent | rect. | 7 | 17 |
| 802 | 72.72 | humidity | 50 | 43200 | > th | dose independent | rect. | 4 | 9 |
| 804 | 72.72 | humidity | 50 | 43200 | > th | dose independent | rect. | 24 | 13 |
| 807 | 72.72 | humidity | 90 | 720 | > th | dose independent | rect. | 4 | 17 |
| 814 | 72.73 | humidity | 50 | 43200 | > th | dose independent | rect. | 2 | 11 |
| 857 | 72.78 | radiation | 20 | 4320 | < th | dose independent | rect. | 21 | 9 |
| 863 | 72.78 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 12 |
| 918 | 72.87 | humidity | 50 | 43200 | < th | dose independent | rect. | 4 | 9 |
| 928 | 72.88 | temperature | 25 | 270 | < th | dose dependent | sin | 10 | NA |
| 948 | 72.89 | wind | 1 | 43200 | < th | dose dependent | sin | 20 | NA |
| 1000 | 72.95 | temperature | 25 | 720 | < th | dose dependent | rect. | 13 | 14 |