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Os04g0586200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Senescence-associated protein SAG102.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.1 (0.0314) R2 : 0.67
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.91 (0.0641) R2dE : 0.669 R2E : 0.667
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.111 (0.0661) R2dN8 : 0.00336 R2N8 : 0.000614
σ : 0.59
deviance : 160.25
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C
peak time of C : --
E
wheather : temperature
threshold : 19.01
memory length : 204
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 16.5
open length of G : 11.1

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
136.81 0.55 13.2 0.756 1.11 1.05 1.25 -1.82 -0.127 22.8 20 79 18 11
148.29 0.567 13.1 0.954 1.11 1.03 0.806 -- -0.0706 22.5 20 70 18.1 11
140.02 0.551 13.2 0.76 1.06 1.08 -- -1.17 -0.114 22.6 19.54 69 18 11.1
145.67 0.562 13.1 0.897 1.04 1.09 -- -- -0.0921 22.4 19.66 71 18.1 10.9
152.5 0.575 13.1 0.728 -- 1.8 -- -0.501 -0.0473 -- 19 137 17.3 10.9
194 0.653 13.1 1.12 2.02 -- 0.425 -- 0.0371 23.3 -- -- -- --
194.78 0.654 13.1 1.1 2.02 -- -- -- 0.0356 23.3 -- -- -- --
148.08 0.567 13.1 0.677 -- 1.86 -- -- -0.0663 -- 18.9 200 16.5 11
161.28 0.591 13.1 -- 0.632 1.54 -- -- -0.124 21.2 19.09 136 17.6 11
450.03 0.991 13.1 1.16 -- -- -- -- 0.0552 -- -- -- -- --
226.95 0.705 13.1 -- 2.03 -- -- -- -0.0874 23.4 -- -- -- --
160.25 0.59 13.1 -- -- 1.91 -- -- -0.111 -- 19.01 204 16.5 11.1
485.29 1.03 13.1 -- -- -- -- -- -0.0731 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 137.90 temperature 20 90 > th dose independent rect. 18 11
3 138.49 temperature 30 90 < th dose dependent rect. 13 18
5 139.14 temperature 25 10 < th dose dependent rect. 13 18
23 142.31 temperature 15 90 > th dose dependent rect. 18 11
25 142.78 temperature 20 10 < th dose independent rect. 13 21
73 145.42 temperature 20 30 < th dose independent rect. 13 17
77 145.53 temperature 10 270 > th dose dependent rect. 16 11
88 145.86 temperature 20 30 > th dose independent rect. 7 22
112 146.77 temperature 20 90 > th dose independent rect. 18 18
154 148.35 temperature 30 270 < th dose dependent rect. 20 10
215 150.13 temperature 20 10 > th dose independent rect. 18 20
271 152.15 temperature 20 90 < th dose independent rect. 23 7
281 152.39 temperature 25 90 < th dose dependent rect. 23 7
297 152.83 humidity 80 43200 < th dose independent rect. 4 7
310 153.09 temperature 20 10 < th dose independent sin 9 NA
320 153.19 humidity 80 43200 > th dose independent rect. 5 5
323 153.20 temperature 20 30 > th dose independent rect. 9 20
330 153.34 temperature 20 90 < th dose independent sin 10 NA
342 153.54 temperature 20 90 < th dose independent rect. 23 11
351 153.70 temperature 20 10 < th dose independent rect. 22 12
353 153.71 radiation 20 14400 < th dose independent rect. 19 11
368 153.92 humidity 80 43200 < th dose independent rect. 3 9
377 154.08 humidity 80 43200 > th dose independent rect. 4 7
392 154.26 humidity 70 43200 > th dose independent rect. 2 14
416 154.51 wind 1 43200 < th dose independent rect. 14 12
431 154.72 wind 1 43200 < th dose dependent rect. 10 15
447 154.86 humidity 80 43200 > th dose independent rect. 7 2
465 154.99 humidity 70 43200 < th dose independent rect. 24 16
467 155.00 humidity 70 43200 > th dose independent sin 3 NA
472 155.03 temperature 20 720 > th dose dependent rect. 17 2
474 155.06 temperature 25 90 < th dose dependent sin 11 NA
482 155.12 wind 1 43200 > th dose independent rect. 14 12
492 155.17 temperature 20 10 < th dose independent rect. 22 21
504 155.23 wind 3 43200 > th dose independent rect. 13 2
527 155.31 wind 5 43200 < th dose dependent rect. 14 1
528 155.32 humidity 80 43200 < th dose independent rect. 8 1
559 155.46 temperature 25 10 < th dose dependent sin 10 NA
564 155.49 radiation 10 14400 > th dose independent rect. 6 1
584 155.51 humidity 70 43200 > th dose independent rect. 18 22
588 155.52 wind 1 43200 < th dose dependent rect. 8 17
595 155.55 wind 1 43200 < th dose dependent sin 18 NA
603 155.57 humidity 50 43200 > th dose dependent rect. 8 1
604 155.58 humidity 70 43200 > th dose independent rect. 8 19
683 155.82 humidity 70 43200 > th dose independent rect. 4 22
717 155.88 radiation 10 14400 > th dose dependent rect. 6 1
742 155.91 humidity 70 43200 > th dose independent no NA NA
763 155.95 wind 3 43200 < th dose independent rect. 13 2
806 156.09 humidity 70 43200 < th dose independent sin 4 NA
808 156.09 humidity 70 43200 > th dose independent rect. 12 23
814 156.12 temperature 20 10 < th dose independent rect. 20 14
817 156.12 humidity 70 43200 < th dose independent rect. 9 21
843 156.20 humidity 70 43200 > th dose independent rect. 14 23
862 156.24 humidity 90 43200 < th dose dependent rect. 8 1
905 156.36 humidity 70 43200 > th dose independent sin 20 NA
944 156.47 humidity 70 43200 < th dose independent no NA NA
951 156.47 humidity 70 43200 < th dose independent rect. 4 23
953 156.48 wind 1 43200 > th dose independent rect. 10 1
968 156.51 humidity 70 43200 < th dose independent rect. 24 23
979 156.53 humidity 70 43200 < th dose independent rect. 2 23
996 156.56 humidity 80 43200 < th dose dependent rect. 23 16