Os04g0577700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF623, plant domain containing protein.
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Os04g0577700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF623, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 143.04 | 0.562 | 8.03 | -0.164 | 2.53 | -0.871 | 0.197 | 0.651 | -0.499 | 5.08 | 1.1 | 75 | -- | -- |
| 143.29 | 0.558 | 8.02 | -0.138 | 2.54 | -0.79 | 0.115 | -- | -0.5 | 5.08 | 1.102 | 74 | -- | -- |
| 143.13 | 0.557 | 8.03 | -0.161 | 2.53 | -0.869 | -- | 0.56 | -0.5 | 5.08 | 1.108 | 74 | -- | -- |
| 143.33 | 0.558 | 8.02 | -0.138 | 2.54 | -0.795 | -- | -- | -0.499 | 5.08 | 1.102 | 74 | -- | -- |
| 318.81 | 0.832 | 8.06 | -0.562 | -- | -1.99 | -- | 0.568 | -0.46 | -- | 2.302 | 161 | -- | -- |
| 153.85 | 0.581 | 8.03 | -0.0138 | 2.76 | -- | 0.372 | -- | -0.557 | 5.05 | -- | -- | -- | -- |
| 154.2 | 0.582 | 8.03 | -0.0143 | 2.76 | -- | -- | -- | -0.559 | 5.06 | -- | -- | -- | -- |
| 318.62 | 0.831 | 8.06 | -0.581 | -- | -1.98 | -- | -- | -0.485 | -- | 2.319 | 161 | -- | -- |
| 143.81 | 0.559 | 8.02 | -- | 2.55 | -0.772 | -- | -- | -0.493 | 5.08 | 1.148 | 73 | -- | -- |
| 553.86 | 1.1 | 8.06 | 0.085 | -- | -- | -- | -- | -0.489 | -- | -- | -- | -- | -- |
| 154.21 | 0.581 | 8.03 | -- | 2.76 | -- | -- | -- | -0.557 | 5.06 | -- | -- | -- | -- |
| 327.09 | 0.842 | 8.04 | -- | -- | -1.9 | -- | -- | -0.424 | -- | 2.345 | 161 | -- | -- |
| 554.05 | 1.1 | 8.06 | -- | -- | -- | -- | -- | -0.498 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 136.76 | wind | 1 | 720 | < th | dose independent | rect. | 4 | 1 |
| 2 | 137.37 | wind | 1 | 720 | < th | dose dependent | rect. | 4 | 1 |
| 5 | 140.39 | temperature | 30 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 19 | 140.50 | wind | 1 | 90 | > th | dose independent | rect. | 23 | 12 |
| 21 | 141.04 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 21 |
| 23 | 141.12 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 25 | 141.37 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 3 |
| 31 | 141.78 | humidity | 90 | 270 | > th | dose dependent | rect. | 8 | 21 |
| 35 | 141.96 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 17 |
| 38 | 142.04 | temperature | 20 | 90 | > th | dose independent | rect. | 17 | 13 |
| 41 | 142.09 | wind | 1 | 90 | > th | dose independent | sin | 5 | NA |
| 42 | 142.10 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 10 |
| 43 | 142.11 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 14 |
| 46 | 142.12 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 8 |
| 49 | 142.15 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 21 |
| 58 | 142.25 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 11 |
| 64 | 142.33 | temperature | 20 | 30 | > th | dose dependent | rect. | 4 | 2 |
| 68 | 142.38 | wind | 1 | 30 | > th | dose independent | rect. | 23 | 23 |
| 70 | 142.39 | humidity | 50 | 270 | > th | dose dependent | rect. | 16 | 13 |
| 77 | 142.47 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 3 |
| 79 | 142.48 | humidity | 90 | 270 | > th | dose dependent | rect. | 13 | 16 |
| 83 | 142.52 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 1 |
| 101 | 142.62 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 106 | 142.70 | wind | 1 | 90 | < th | dose independent | rect. | 24 | 7 |
| 109 | 142.71 | humidity | 70 | 90 | > th | dose dependent | rect. | 15 | 16 |
| 113 | 142.75 | temperature | 15 | 720 | > th | dose dependent | rect. | 18 | 3 |
| 127 | 142.79 | temperature | 20 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 134 | 142.86 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 17 |
| 136 | 142.88 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 11 |
| 147 | 142.93 | temperature | 20 | 10 | < th | dose independent | rect. | 21 | 14 |
| 165 | 143.00 | wind | 7 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 167 | 143.00 | temperature | 10 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 170 | 143.00 | temperature | 30 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 174 | 143.00 | humidity | 50 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 183 | 143.00 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 184 | 143.00 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 185 | 143.00 | radiation | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 195 | 143.00 | temperature | 10 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 204 | 143.04 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 14 |
| 250 | 143.19 | humidity | 50 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 253 | 143.20 | temperature | 20 | 30 | < th | dose independent | rect. | 13 | 21 |
| 271 | 143.28 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 294 | 143.33 | temperature | 25 | 720 | < th | dose independent | rect. | 23 | 1 |
| 295 | 143.33 | wind | 3 | 720 | < th | dose dependent | rect. | 24 | 5 |
| 311 | 143.38 | temperature | 20 | 30 | < th | dose independent | rect. | 17 | 18 |
| 319 | 143.39 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 4 |
| 342 | 143.47 | wind | 1 | 90 | < th | dose independent | sin | 6 | NA |
| 344 | 143.47 | humidity | 70 | 10 | > th | dose dependent | rect. | 17 | 14 |
| 348 | 143.48 | temperature | 20 | 10 | < th | dose independent | rect. | 21 | 10 |
| 358 | 143.52 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 1 |
| 420 | 143.71 | wind | 1 | 30 | > th | dose independent | rect. | 21 | 23 |
| 422 | 143.72 | temperature | 20 | 30 | < th | dose independent | sin | 10 | NA |
| 434 | 143.74 | temperature | 20 | 30 | < th | dose independent | rect. | 13 | 19 |
| 436 | 143.74 | wind | 3 | 90 | < th | dose dependent | rect. | 1 | 6 |
| 441 | 143.75 | wind | 1 | 30 | > th | dose independent | rect. | 23 | 21 |
| 459 | 143.80 | wind | 1 | 30 | > th | dose independent | rect. | 23 | 18 |
| 479 | 143.82 | wind | 1 | 90 | < th | dose independent | rect. | 24 | 13 |
| 486 | 143.84 | temperature | 20 | 10 | > th | dose independent | sin | 9 | NA |
| 487 | 143.84 | temperature | 20 | 90 | > th | dose independent | rect. | 4 | 1 |
| 542 | 143.92 | humidity | 90 | 90 | > th | dose dependent | rect. | 1 | 22 |
| 573 | 143.98 | temperature | 20 | 30 | > th | dose independent | rect. | 11 | 21 |
| 581 | 144.00 | humidity | 90 | 270 | > th | dose dependent | sin | 13 | NA |
| 588 | 144.01 | wind | 1 | 90 | < th | dose independent | rect. | 24 | 21 |
| 591 | 144.01 | humidity | 90 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 595 | 144.03 | wind | 1 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 671 | 144.17 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 12 |
| 698 | 144.21 | wind | 1 | 90 | < th | dose independent | rect. | 13 | 18 |
| 699 | 144.21 | wind | 1 | 90 | < th | dose dependent | sin | 5 | NA |
| 700 | 144.22 | wind | 1 | 90 | < th | dose independent | rect. | 24 | 18 |
| 713 | 144.24 | wind | 9 | 720 | < th | dose independent | rect. | 12 | 23 |
| 739 | 144.28 | humidity | 90 | 90 | > th | dose independent | rect. | 1 | 22 |
| 766 | 144.34 | humidity | 90 | 90 | > th | dose independent | rect. | 3 | 20 |
| 769 | 144.35 | wind | 1 | 90 | < th | dose independent | rect. | 16 | 15 |
| 775 | 144.35 | wind | 1 | 90 | < th | dose dependent | rect. | 24 | 21 |
| 802 | 144.41 | humidity | 90 | 90 | > th | dose dependent | rect. | 3 | 20 |
| 803 | 144.41 | humidity | 90 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 805 | 144.42 | wind | 1 | 90 | < th | dose independent | rect. | 20 | 11 |
| 815 | 144.43 | humidity | 90 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 835 | 144.46 | humidity | 90 | 90 | > th | dose dependent | rect. | 14 | 22 |
| 837 | 144.47 | wind | 1 | 90 | > th | dose independent | no | NA | NA |
| 845 | 144.47 | wind | 1 | 90 | > th | dose independent | rect. | 12 | 23 |
| 870 | 144.52 | humidity | 90 | 90 | > th | dose dependent | no | NA | NA |
| 879 | 144.53 | wind | 1 | 90 | < th | dose dependent | rect. | 24 | 18 |
| 887 | 144.54 | wind | 1 | 90 | < th | dose dependent | rect. | 24 | 11 |
| 893 | 144.55 | wind | 1 | 90 | < th | dose dependent | rect. | 24 | 14 |
| 903 | 144.56 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 9 |
| 922 | 144.59 | temperature | 20 | 30 | > th | dose independent | rect. | 2 | 23 |
| 925 | 144.59 | humidity | 90 | 90 | > th | dose dependent | rect. | 17 | 19 |
| 935 | 144.60 | humidity | 90 | 90 | > th | dose independent | rect. | 8 | 22 |
| 985 | 144.65 | humidity | 90 | 270 | > th | dose independent | rect. | 9 | 20 |
| 986 | 144.65 | wind | 1 | 30 | > th | dose independent | rect. | 1 | 23 |