Os04g0541900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0541900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 144.39 | 0.565 | 6.67 | -2.8 | 2.19 | -1.88 | 1.14 | -0.63 | -0.764 | 3.8 | 25.12 | 10 | -- | -- |
| 144.07 | 0.563 | 6.69 | -2.91 | 2.34 | -1.85 | 1 | -- | -0.826 | 3.75 | 26.96 | 7 | -- | -- |
| 146.88 | 0.569 | 6.68 | -2.9 | 2.18 | -1.84 | -- | -0.0784 | -0.787 | 3.75 | 25.12 | 10 | -- | -- |
| 146.9 | 0.568 | 6.69 | -2.91 | 2.18 | -1.84 | -- | -- | -0.79 | 3.75 | 25.12 | 10 | -- | -- |
| 380.62 | 0.909 | 6.62 | -2.51 | -- | 0.17 | -- | 3.63 | -0.401 | -- | 18.19 | 2 | -- | -- |
| 194.44 | 0.654 | 6.6 | -2.47 | 1.89 | -- | 1.02 | -- | -0.42 | 4.26 | -- | -- | -- | -- |
| 197.33 | 0.658 | 6.6 | -2.48 | 1.89 | -- | -- | -- | -0.426 | 4.21 | -- | -- | -- | -- |
| 378.18 | 0.91 | 6.64 | -2.6 | -- | -0.889 | -- | -- | -0.515 | -- | 23.97 | 4 | -- | -- |
| 350.82 | 0.877 | 6.57 | -- | 1.95 | -0.745 | -- | -- | -0.278 | 4.03 | 25.12 | 10 | -- | -- |
| 390.69 | 0.924 | 6.61 | -2.41 | -- | -- | -- | -- | -0.376 | -- | -- | -- | -- | -- |
| 359.93 | 0.887 | 6.54 | -- | 1.84 | -- | -- | -- | -0.149 | 4.24 | -- | -- | -- | -- |
| 514.83 | 1.06 | 6.52 | -- | -- | 1.35 | -- | -- | 0.0408 | -- | 35.59 | 204 | -- | -- |
| 543.64 | 1.09 | 6.55 | -- | -- | -- | -- | -- | -0.108 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 139.67 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 22 |
| 5 | 142.38 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 7 | 142.86 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 23 |
| 10 | 143.17 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 5 | 21 |
| 22 | 143.97 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 26 | 144.15 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 31 | 144.33 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 33 | 144.42 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 34 | 144.43 | temperature | 25.0 | 10 | < th | dose dependent | no | NA | NA |
| 36 | 144.53 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 38 | 144.56 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 39 | 144.58 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 40 | 144.61 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 41 | 144.62 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 42 | 144.66 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 45 | 144.81 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 55 | 144.96 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 60 | 145.14 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 123 | 146.90 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 125 | 146.96 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 2 |
| 126 | 146.96 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 2 |
| 138 | 147.07 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 24 | 23 |
| 156 | 147.38 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 11 |
| 164 | 147.46 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 168 | 147.47 | temperature | 25.0 | 10 | < th | dose dependent | sin | 20 | NA |
| 183 | 147.68 | wind | 7.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 191 | 147.86 | wind | 7.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 196 | 147.93 | temperature | 10.0 | 90 | > th | dose dependent | no | NA | NA |
| 200 | 147.95 | wind | 5.0 | 43200 | > th | dose independent | rect. | 13 | 16 |
| 214 | 148.16 | temperature | 10.0 | 10 | > th | dose dependent | sin | 16 | NA |
| 215 | 148.16 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 16 | 10 |
| 220 | 148.21 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 226 | 148.26 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 16 | 12 |
| 274 | 148.60 | wind | 5.0 | 43200 | < th | dose independent | rect. | 13 | 16 |
| 311 | 148.88 | temperature | 15.0 | 720 | > th | dose dependent | sin | 16 | NA |
| 314 | 148.90 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 355 | 149.19 | wind | 5.0 | 43200 | > th | dose independent | sin | 14 | NA |
| 398 | 149.40 | wind | 7.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 399 | 149.40 | wind | 7.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 423 | 149.56 | wind | 5.0 | 43200 | < th | dose independent | sin | 14 | NA |
| 450 | 149.74 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 452 | 149.74 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 471 | 149.82 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 16 | 6 |
| 480 | 149.88 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 8 | 14 |
| 497 | 149.98 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 14 | 18 |
| 507 | 150.04 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 14 | 15 |
| 637 | 150.69 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 16 | 11 |
| 641 | 150.70 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 16 | 9 |
| 713 | 150.99 | wind | 5.0 | 43200 | > th | dose dependent | sin | 14 | NA |
| 815 | 151.40 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 16 | 14 |
| 872 | 151.60 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 16 | 20 |
| 883 | 151.63 | temperature | 30.0 | 10 | < th | dose dependent | sin | 17 | NA |
| 891 | 151.64 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 15 | 21 |
| 894 | 151.65 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 914 | 151.70 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 918 | 151.71 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 945 | 151.80 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 990 | 151.94 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 17 | 17 |