Os04g0531700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glucose/ribitol dehydrogenase family protein.
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Os04g0531700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glucose/ribitol dehydrogenase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.6 | 0.268 | 9.71 | -1.13 | 0.662 | 1.14 | -0.163 | 0.0313 | -0.176 | 5.12 | 9.32 | 12 | -- | -- |
| 32.6 | 0.266 | 9.71 | -1.13 | 0.662 | 1.14 | -0.169 | -- | -0.177 | 5.12 | 9.482 | 12 | -- | -- |
| 32.66 | 0.266 | 9.71 | -1.11 | 0.664 | 1.15 | -- | 0.129 | -0.172 | 5.11 | 8.672 | 12 | -- | -- |
| 32.68 | 0.266 | 9.71 | -1.13 | 0.663 | 1.15 | -- | -- | -0.177 | 5.11 | 8.671 | 12 | -- | -- |
| 51.27 | 0.335 | 9.7 | -1.01 | -- | 0.618 | -- | -0.0316 | -0.0888 | -- | 8.672 | 12 | -- | -- |
| 45.04 | 0.315 | 9.67 | -0.9 | 0.468 | -- | -0.342 | -- | -0.0149 | 6.87 | -- | -- | -- | -- |
| 45.34 | 0.315 | 9.67 | -0.906 | 0.467 | -- | -- | -- | -0.0138 | 6.94 | -- | -- | -- | -- |
| 51.25 | 0.335 | 9.7 | -1.01 | -- | 0.625 | -- | -- | -0.0876 | -- | 11.54 | 3 | -- | -- |
| 63.09 | 0.372 | 9.67 | -- | 0.535 | 0.605 | -- | -- | 0.0151 | 5.89 | 0.8385 | 23 | -- | -- |
| 56.79 | 0.352 | 9.68 | -0.896 | -- | -- | -- | -- | -0.0051 | -- | -- | -- | -- | -- |
| 66.97 | 0.383 | 9.65 | -- | 0.457 | -- | -- | -- | 0.0871 | 7.06 | -- | -- | -- | -- |
| 76.43 | 0.409 | 9.67 | -- | -- | 0.26 | -- | -- | 0.0587 | -- | 19.5 | 3 | -- | -- |
| 77.98 | 0.412 | 9.66 | -- | -- | -- | -- | -- | 0.0943 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.18 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 11 |
| 3 | 31.39 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 5 | 31.43 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 10 | 31.65 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 23 | 3 |
| 12 | 31.68 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 13 | 31.68 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 23 | 5 |
| 19 | 31.73 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 26 | 31.78 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 20 | 9 |
| 54 | 32.00 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 67 | 32.08 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 10 |
| 69 | 32.11 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 90 | 32.30 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 11 |
| 111 | 32.39 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 20 | 6 |
| 123 | 32.43 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 12 | NA |
| 126 | 32.43 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 20 | 6 |
| 172 | 32.50 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 192 | 32.55 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 224 | 32.61 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 232 | 32.62 | temperature | 10.0 | 10 | > th | dose dependent | no | NA | NA |
| 233 | 32.63 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 235 | 32.63 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 254 | 32.66 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 269 | 32.69 | temperature | 30.0 | 1440 | < th | dose dependent | sin | 13 | NA |
| 301 | 32.73 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 320 | 32.75 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 391 | 32.85 | wind | 7.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 422 | 32.88 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 551 | 33.06 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 566 | 33.07 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 573 | 33.08 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 22 |
| 583 | 33.09 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 623 | 33.13 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 624 | 33.14 | temperature | 30.0 | 10 | < th | dose dependent | no | NA | NA |
| 647 | 33.16 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 675 | 33.19 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 738 | 33.26 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 803 | 33.31 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 830 | 33.34 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 831 | 33.34 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 917 | 33.44 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 939 | 33.46 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 5 |
| 976 | 33.48 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 997 | 33.50 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 7 | 23 |