BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0531700 Os04g0531700|AK119481
(109 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G61220.2 | chr3:22663025-22664316 FORWARD LENGTH=304 110 1e-25
AT2G24190.2 | chr2:10283740-10284934 REVERSE LENGTH=302 110 2e-25
AT1G01800.1 | chr1:293396-294888 FORWARD LENGTH=296 99 5e-22
AT5G61830.1 | chr5:24837335-24838788 FORWARD LENGTH=317 84 2e-17
AT5G51030.1 | chr5:20747862-20749352 REVERSE LENGTH=315 75 5e-15
AT3G59710.1 | chr3:22055220-22057156 REVERSE LENGTH=303 65 9e-12
AT5G50130.1 | chr5:20390066-20393053 FORWARD LENGTH=340 55 8e-09
AT5G50700.1 | chr5:20623259-20624995 REVERSE LENGTH=350 47 1e-06
AT5G50600.1 | chr5:20589917-20591653 REVERSE LENGTH=350 47 1e-06
AT4G24050.1 | chr4:12497287-12499661 FORWARD LENGTH=333 47 1e-06
AT4G20760.1 | chr4:11129043-11130541 FORWARD LENGTH=299 47 1e-06
AT2G47130.1 | chr2:19349627-19350481 REVERSE LENGTH=258 47 2e-06
AT1G64590.1 | chr1:23993592-23995200 FORWARD LENGTH=335 47 3e-06
AT4G09750.1 | chr4:6146770-6148698 FORWARD LENGTH=323 47 3e-06
AT2G37540.1 | chr2:15751695-15753820 REVERSE LENGTH=322 47 3e-06
AT4G23420.3 | chr4:12226060-12228562 FORWARD LENGTH=334 45 7e-06
AT2G47140.1 | chr2:19350970-19352059 REVERSE LENGTH=258 45 1e-05
>AT3G61220.2 | chr3:22663025-22664316 FORWARD LENGTH=304
Length = 303
Score = 110 bits (275), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 68/86 (79%), Gaps = 1/86 (1%)
Query: 13 RIALVTGGNKGVGLETCRQLASRGLRVVLTARNEARGLEAVDGIRRS-GAADSDVVFHQL 71
R A+VTG N+G+G E CRQLAS G+RVVLT+R+E RGLEAV+ +++ +D ++FHQL
Sbjct: 14 RYAVVTGANRGIGFEICRQLASEGIRVVLTSRDENRGLEAVETLKKELEISDQSLLFHQL 73
Query: 72 DVTDAASVARLADFVRDQFGRLDILV 97
DV D AS+ LA+FV+ QFG+LDILV
Sbjct: 74 DVADPASITSLAEFVKTQFGKLDILV 99
>AT2G24190.2 | chr2:10283740-10284934 REVERSE LENGTH=302
Length = 301
Score = 110 bits (275), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 70/88 (79%), Gaps = 1/88 (1%)
Query: 11 IIRIALVTGGNKGVGLETCRQLASRGLRVVLTARNEARGLEAVDGIRRS-GAADSDVVFH 69
+ R A+VTGGN+G+G E CRQLA++G+RV+LT+R+E +GLEAV+ +++ +D +VFH
Sbjct: 10 LCRYAIVTGGNRGIGFEICRQLANKGIRVILTSRDEKQGLEAVETLKKELEISDQSIVFH 69
Query: 70 QLDVTDAASVARLADFVRDQFGRLDILV 97
QLDV+D SV LA+FV+ FG+LDIL+
Sbjct: 70 QLDVSDPVSVTSLAEFVKTHFGKLDILI 97
>AT1G01800.1 | chr1:293396-294888 FORWARD LENGTH=296
Length = 295
Score = 98.6 bits (244), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 13 RIALVTGGNKGVGLETCRQLASRGLRVVLTARNEARGLEAVDGIR-RSGAADSDVVFHQL 71
R+A+VTG NKG+G E CRQLA+ G+ VVLTAR+E +GL AV ++ +G +D + FH L
Sbjct: 5 RVAVVTGSNKGIGFEICRQLANNGITVVLTARDENKGLAAVQKLKTENGFSDQAISFHPL 64
Query: 72 DVTDAASVARLADFVRDQFGRLDILV 97
DV++ ++A LA FV+ +FG+LDILV
Sbjct: 65 DVSNPDTIASLAAFVKTRFGKLDILV 90
>AT5G61830.1 | chr5:24837335-24838788 FORWARD LENGTH=317
Length = 316
Score = 83.6 bits (205), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 58/95 (61%), Gaps = 5/95 (5%)
Query: 3 RSWHCGLSIIRIALVTGGNKGVGLETCRQLASRGLRVVLTARNEARGLEAVDGIRRSGAA 62
R W C +A+VTG N+G+G E RQLA GL VVLTARN GLEAV +R
Sbjct: 31 RWWSCE----NVAVVTGSNRGIGFEIARQLAVHGLTVVLTARNVNAGLEAVKSLRHQEEG 86
Query: 63 DSDVVFHQLDVTDAASVARLADFVRDQFGRLDILV 97
V FHQLDVTD++S+ +++ FG LDILV
Sbjct: 87 -LKVYFHQLDVTDSSSIREFGCWLKQTFGGLDILV 120
>AT5G51030.1 | chr5:20747862-20749352 REVERSE LENGTH=315
Length = 314
Score = 75.5 bits (184), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 14 IALVTGGNKGVGLETCRQLASRGLRVVLTARNEARGLEAVDGIRRSGAADSDVVFHQLDV 73
+A+VTG N+G+G E RQLA GL V+LT+R+E G+EA ++ G +V FH+LD+
Sbjct: 39 VAVVTGANRGIGFEMVRQLAGHGLTVILTSRDENVGVEAAKILQEGGF---NVDFHRLDI 95
Query: 74 TDAASVARLADFVRDQFGRLDILV 97
D++S+ +++++++G +D+L+
Sbjct: 96 LDSSSIQEFCEWIKEKYGFIDVLI 119
>AT3G59710.1 | chr3:22055220-22057156 REVERSE LENGTH=303
Length = 302
Score = 64.7 bits (156), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 15 ALVTGGNKGVGLETCRQLASRGLRVVLTARNEARGLEAVDGIRRSGAADSDVVFHQLDVT 74
A+VTG NKG+G ++L GL VVLTARN G +A + +RR G +V F LD++
Sbjct: 31 AVVTGANKGIGFAVVKRLLELGLTVVLTARNAENGSQAAESLRRIGFG--NVHFCCLDIS 88
Query: 75 DAASVARLADFVRDQFGRLDILV 97
D +S+A A + G LDILV
Sbjct: 89 DPSSIAAFASWFGRNLGILDILV 111
>AT5G50130.1 | chr5:20390066-20393053 FORWARD LENGTH=340
Length = 339
Score = 55.1 bits (131), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 15 ALVTGGNKGVGLETCRQLASRGLRVVLTARNEARGLEAVDGIRRSGAADSDVVFHQLDVT 74
A++TGG G+G ET R LA RG+RVV+ R+ + + I R ++D++ ++D++
Sbjct: 39 AIITGGTSGIGAETARVLAKRGVRVVMAVRDMKKAEMVKERIIREN-PEADIILFEIDLS 97
Query: 75 DAASVARLADFVRDQFGRLDILV 97
+SVAR Q L+IL+
Sbjct: 98 SLSSVARFCSQFLSQDLPLNILI 120
>AT5G50700.1 | chr5:20623259-20624995 REVERSE LENGTH=350
Length = 349
Score = 47.4 bits (111), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 13 RIALVTGGNKGVGLETCRQLASRGLRVVLTARNEARGLEAVDGIRRSGAADSDVVFHQLD 72
++ L+TG + G+G + + A RG + LTAR + R LE V I R + + V H D
Sbjct: 48 KVVLITGASSGIGEQLAYEYACRGACLALTARRKNR-LEEVAEIARELGSPNVVTVHA-D 105
Query: 73 VTDAASVARLADFVRDQFGRLDILV 97
V+ R+ D FGRLD LV
Sbjct: 106 VSKPDDCRRIVDDTITHFGRLDHLV 130
>AT5G50600.1 | chr5:20589917-20591653 REVERSE LENGTH=350
Length = 349
Score = 47.4 bits (111), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 13 RIALVTGGNKGVGLETCRQLASRGLRVVLTARNEARGLEAVDGIRRSGAADSDVVFHQLD 72
++ L+TG + G+G + + A RG + LTAR + R LE V I R + + V H D
Sbjct: 48 KVVLITGASSGIGEQLAYEYACRGACLALTARRKNR-LEEVAEIARELGSPNVVTVHA-D 105
Query: 73 VTDAASVARLADFVRDQFGRLDILV 97
V+ R+ D FGRLD LV
Sbjct: 106 VSKPDDCRRIVDDTITHFGRLDHLV 130
>AT4G24050.1 | chr4:12497287-12499661 FORWARD LENGTH=333
Length = 332
Score = 47.4 bits (111), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 6 HCGLSIIRIALVTGGNKGVGLETCRQLASRGLRVVLTARNEARGLEAVDGIRRSGAADSD 65
+C L I A++TG G+G ET R LA RG R++ ARN EA + I S +++
Sbjct: 29 NCDLRSI-TAVITGATSGIGAETARVLAKRGARLIFPARNVKAAEEAKERI-VSEFPETE 86
Query: 66 VVFHQLDVTDAASVARLADFVRDQFGRLDI 95
+V +LD++ S+A + +FV D F LD+
Sbjct: 87 IVVMKLDLS---SIASVRNFVAD-FESLDL 112
>AT4G20760.1 | chr4:11129043-11130541 FORWARD LENGTH=299
Length = 298
Score = 47.4 bits (111), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 10/101 (9%)
Query: 2 VRSWHCGLSIIRIALVTGGNKGVGLETCRQL--ASRGLRVVLTARNEARGLEAVDGIRRS 59
V +W G+S +V G ++G+GLE RQL ++ VV T RN D R
Sbjct: 38 VPNWKGGVS-----MVQGASRGIGLEFVRQLLENNKNGYVVATCRNPKEATSLSDLKNR- 91
Query: 60 GAADSDVVFHQLDVTDAASVARLADFVRDQFGRLDILVWAS 100
+ +LDVTD ++ A+ VR+++G L++L+ A+
Sbjct: 92 --FSERLFIQKLDVTDETTIEESAESVREKYGSLNLLINAA 130
>AT2G47130.1 | chr2:19349627-19350481 REVERSE LENGTH=258
Length = 257
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 13 RIALVTGGNKGVGLETCRQLASRGLRVVLTARNEARGLEAVDGIRRSGAADSDVVFHQLD 72
+IA++TGG G+G E R G +VV+ E G + + A+ F++ D
Sbjct: 9 KIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKAS-----FYRCD 63
Query: 73 VTDAASVARLADFVRDQFGRLDIL 96
VT+ V F +++G+LD+L
Sbjct: 64 VTNEKEVENAVKFTVEKYGKLDVL 87
>AT1G64590.1 | chr1:23993592-23995200 FORWARD LENGTH=335
Length = 334
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 15 ALVTGGNKGVGLETCRQLASRGLRVVLTARNEARGLEAVDGIRRSGAADSDVVFHQLDVT 74
A++TG G+G ET R LA RG R+VL AR+ + E S D++++ LD++
Sbjct: 37 AIITGATSGIGAETARVLAKRGARLVLPARS-VKTAEETKARILSEFPDAEIIVMHLDLS 95
Query: 75 DAASVARLADFVRDQFGRLDILV 97
SV R D L+IL+
Sbjct: 96 SLTSVRRFVDDFESLNLPLNILI 118
>AT4G09750.1 | chr4:6146770-6148698 FORWARD LENGTH=323
Length = 322
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 16 LVTGGNKGVGLETCRQLASRGLRVVLTARNEARGLEAVDGIRRSGAADSDVVFHQLDVTD 75
+VTG N G+G LASRG V + RN+ RG EA+ I+ S + +V L+V D
Sbjct: 47 VVTGANSGIGFAAAEGLASRGATVYMVCRNKERGQEALSKIQTS-TGNQNVY---LEVCD 102
Query: 76 AASVARLADFVRDQFGRLDILV 97
+SV + F F D+ V
Sbjct: 103 LSSVNEIKSFA-SSFASKDVPV 123
>AT2G37540.1 | chr2:15751695-15753820 REVERSE LENGTH=322
Length = 321
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 15 ALVTGGNKGVGLETCRQLASRGLRVVLTARNEARGLEAVDGIRRSGAADSDVVFHQLDVT 74
A++TGG G+GLE R LA RG V++ ARN E+ + I + ++ V + Q+DV+
Sbjct: 36 AIITGGTSGIGLEAARVLAMRGAHVIIAARNPKAANESKEMILQMN-PNARVDYLQIDVS 94
Query: 75 DAASVARLADFVRDQFGRLDI 95
S+ + FV DQF L++
Sbjct: 95 ---SIKSVRSFV-DQFLALNV 111
>AT4G23420.3 | chr4:12226060-12228562 FORWARD LENGTH=334
Length = 333
Score = 45.1 bits (105), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 15 ALVTGGNKGVGLETCRQLASRGLRVVLTARNEARGLEAV-DGIRRSGAADSDVVFHQLDV 73
A+VTG + G+G+ET R LA RG+ VV+ RN G + D +++ A DV+ +L++
Sbjct: 49 AIVTGASSGIGVETARVLALRGVHVVMAVRNTGAGAKVKEDIVKQVPGAKVDVM--ELEL 106
Query: 74 TDAASVARLADFVRDQFGRLDILV 97
+ SV + A + L++L+
Sbjct: 107 SSMESVRKFASEYKSAGLPLNLLI 130
>AT2G47140.1 | chr2:19350970-19352059 REVERSE LENGTH=258
Length = 257
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 13 RIALVTGGNKGVGLETCRQLASRGLRVVLTARNEARGLEAVDGIRRSGAADSDVVFHQLD 72
+I ++TGG G+G E+ R G RVV+ + G I A+ ++ D
Sbjct: 9 KIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKAS-----YYHCD 63
Query: 73 VTDAASVARLADFVRDQFGRLDIL 96
VT+ V F +++G+LD+L
Sbjct: 64 VTNETEVENAVKFTVEKYGKLDVL 87
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.325 0.138 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,020,176
Number of extensions: 62089
Number of successful extensions: 318
Number of sequences better than 1.0e-05: 28
Number of HSP's gapped: 318
Number of HSP's successfully gapped: 28
Length of query: 109
Length of database: 11,106,569
Length adjustment: 78
Effective length of query: 31
Effective length of database: 8,968,121
Effective search space: 278011751
Effective search space used: 278011751
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 104 (44.7 bits)