Os04g0508300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glutaredoxin.
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Os04g0508300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glutaredoxin.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.52 | 0.185 | 15.3 | 0.393 | 0.581 | -0.35 | 0.125 | 0.186 | 0.117 | 21.8 | 88.58 | 317 | -- | -- |
| 15.58 | 0.184 | 15.3 | 0.402 | 0.579 | -0.341 | 0.113 | -- | 0.119 | 21.8 | 88.04 | 322 | -- | -- |
| 15.58 | 0.184 | 15.3 | 0.389 | 0.582 | -0.346 | -- | 0.172 | 0.118 | 21.8 | 88.47 | 316 | -- | -- |
| 15.63 | 0.184 | 15.3 | 0.4 | 0.574 | -0.342 | -- | -- | 0.119 | 21.7 | 88.25 | 338 | -- | -- |
| 24.9 | 0.232 | 15.3 | 0.368 | -- | -0.797 | -- | 0.103 | 0.098 | -- | 74 | 742 | -- | -- |
| 17.84 | 0.198 | 15.3 | 0.359 | 0.667 | -- | 0.091 | -- | 0.173 | 20.9 | -- | -- | -- | -- |
| 17.87 | 0.198 | 15.3 | 0.356 | 0.667 | -- | -- | -- | 0.173 | 20.9 | -- | -- | -- | -- |
| 24.92 | 0.233 | 15.3 | 0.377 | -- | -0.796 | -- | -- | 0.1 | -- | 74 | 741 | -- | -- |
| 19.7 | 0.207 | 15.3 | -- | 0.592 | -0.286 | -- | -- | 0.0883 | 21.6 | 89 | 335 | -- | -- |
| 43.24 | 0.307 | 15.3 | 0.356 | -- | -- | -- | -- | 0.168 | -- | -- | -- | -- | -- |
| 21.21 | 0.215 | 15.3 | -- | 0.666 | -- | -- | -- | 0.133 | 20.9 | -- | -- | -- | -- |
| 28.57 | 0.249 | 15.3 | -- | -- | -0.8 | -- | -- | 0.0637 | -- | 71.05 | 748 | -- | -- |
| 46.59 | 0.319 | 15.3 | -- | -- | -- | -- | -- | 0.129 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 15.21 | humidity | 90 | 270 | < th | dose independent | rect. | 18 | 20 |
| 2 | 15.22 | humidity | 90 | 270 | < th | dose independent | rect. | 21 | 16 |
| 17 | 15.42 | humidity | 90 | 270 | > th | dose independent | sin | 9 | NA |
| 19 | 15.42 | humidity | 80 | 270 | > th | dose dependent | sin | 9 | NA |
| 25 | 15.46 | humidity | 90 | 270 | > th | dose independent | rect. | 21 | 12 |
| 30 | 15.48 | humidity | 90 | 270 | < th | dose independent | sin | 8 | NA |
| 36 | 15.50 | humidity | 90 | 270 | > th | dose independent | rect. | 18 | 15 |
| 50 | 15.53 | humidity | 80 | 270 | > th | dose dependent | rect. | 18 | 14 |
| 60 | 15.55 | humidity | 80 | 270 | > th | dose dependent | rect. | 21 | 12 |
| 135 | 15.66 | humidity | 90 | 270 | > th | dose independent | rect. | 21 | 22 |
| 195 | 15.69 | humidity | 90 | 270 | > th | dose dependent | rect. | 8 | 23 |
| 226 | 15.71 | humidity | 90 | 270 | > th | dose independent | rect. | 23 | 23 |
| 236 | 15.71 | humidity | 90 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 251 | 15.72 | humidity | 90 | 270 | > th | dose dependent | no | NA | NA |
| 263 | 15.72 | humidity | 90 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 318 | 15.75 | humidity | 90 | 270 | > th | dose independent | no | NA | NA |
| 354 | 15.78 | humidity | 90 | 270 | < th | dose independent | rect. | 4 | 22 |
| 416 | 15.82 | humidity | 90 | 270 | < th | dose independent | rect. | 8 | 23 |
| 424 | 15.83 | humidity | 90 | 270 | < th | dose independent | no | NA | NA |
| 467 | 15.86 | temperature | 20 | 720 | < th | dose dependent | rect. | 10 | 14 |
| 484 | 15.88 | temperature | 20 | 720 | < th | dose dependent | rect. | 15 | 9 |
| 490 | 15.89 | humidity | 90 | 270 | < th | dose independent | rect. | 20 | 10 |
| 497 | 15.89 | temperature | 20 | 720 | < th | dose dependent | rect. | 16 | 7 |
| 629 | 15.99 | temperature | 20 | 720 | < th | dose independent | rect. | 10 | 14 |
| 712 | 16.04 | humidity | 90 | 270 | < th | dose dependent | rect. | 20 | 10 |
| 718 | 16.05 | temperature | 15 | 30 | > th | dose independent | rect. | 9 | 18 |
| 721 | 16.05 | humidity | 90 | 270 | < th | dose independent | rect. | 23 | 23 |
| 742 | 16.06 | humidity | 90 | 1440 | > th | dose dependent | rect. | 10 | 17 |
| 743 | 16.06 | humidity | 90 | 1440 | > th | dose dependent | rect. | 10 | 19 |
| 759 | 16.07 | humidity | 90 | 1440 | > th | dose dependent | sin | 17 | NA |
| 761 | 16.07 | temperature | 20 | 270 | < th | dose dependent | rect. | 18 | 10 |
| 777 | 16.08 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 778 | 16.08 | temperature | 20 | 720 | < th | dose dependent | rect. | 21 | 2 |
| 788 | 16.08 | temperature | 20 | 270 | < th | dose dependent | rect. | 11 | 17 |
| 799 | 16.09 | humidity | 80 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 821 | 16.09 | humidity | 90 | 1440 | > th | dose dependent | rect. | 13 | 16 |
| 845 | 16.10 | temperature | 20 | 270 | < th | dose dependent | sin | 15 | NA |
| 852 | 16.10 | humidity | 90 | 1440 | > th | dose dependent | rect. | 13 | 14 |
| 860 | 16.11 | wind | 1 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 871 | 16.11 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 935 | 16.14 | humidity | 80 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 936 | 16.14 | temperature | 15 | 270 | > th | dose independent | rect. | 18 | 9 |
| 962 | 16.15 | temperature | 20 | 720 | < th | dose independent | sin | 19 | NA |
| 972 | 16.15 | humidity | 90 | 270 | < th | dose dependent | sin | 9 | NA |
| 992 | 16.16 | humidity | 90 | 1440 | > th | dose independent | rect. | 10 | 18 |
| 999 | 16.16 | humidity | 90 | 1440 | > th | dose dependent | rect. | 11 | 11 |