BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0508300 Os04g0508300|AK065962
(112 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G63030.1 | chr5:25286352-25287517 FORWARD LENGTH=126 142 3e-35
AT5G40370.2 | chr5:16147826-16148900 REVERSE LENGTH=137 136 2e-33
AT5G20500.1 | chr5:6938652-6939665 FORWARD LENGTH=136 100 2e-22
AT1G77370.1 | chr1:29073916-29074642 FORWARD LENGTH=131 97 2e-21
AT4G28730.1 | chr4:14199174-14200712 FORWARD LENGTH=175 94 1e-20
AT2G20270.2 | chr2:8738001-8739617 REVERSE LENGTH=207 90 2e-19
AT5G18600.1 | chr5:6183466-6183774 REVERSE LENGTH=103 65 9e-12
AT4G15700.1 | chr4:8937545-8937853 FORWARD LENGTH=103 62 5e-11
AT3G62960.1 | chr3:23268780-23269088 FORWARD LENGTH=103 62 6e-11
AT4G15680.1 | chr4:8931813-8932121 FORWARD LENGTH=103 61 1e-10
AT3G62950.1 | chr3:23266303-23266614 FORWARD LENGTH=104 60 2e-10
AT4G15660.1 | chr4:8925928-8926236 FORWARD LENGTH=103 60 2e-10
AT4G15670.1 | chr4:8929237-8929545 FORWARD LENGTH=103 60 3e-10
AT2G47880.1 | chr2:19605124-19605432 FORWARD LENGTH=103 59 4e-10
AT4G33040.1 | chr4:15940779-15941213 REVERSE LENGTH=145 59 5e-10
AT4G15690.1 | chr4:8934444-8934752 FORWARD LENGTH=103 59 5e-10
AT3G62930.1 | chr3:23261538-23261846 REVERSE LENGTH=103 59 5e-10
AT2G47870.1 | chr2:19603339-19603650 FORWARD LENGTH=104 59 6e-10
AT5G14070.1 | chr5:4541915-4542337 FORWARD LENGTH=141 58 9e-10
AT1G03020.1 | chr1:698207-698515 REVERSE LENGTH=103 58 9e-10
AT2G30540.1 | chr2:13011259-13011567 REVERSE LENGTH=103 57 1e-09
AT1G06830.1 | chr1:2097189-2097488 FORWARD LENGTH=100 57 2e-09
AT3G21460.1 | chr3:7557567-7557875 REVERSE LENGTH=103 57 2e-09
AT3G02000.1 | chr3:332512-332922 REVERSE LENGTH=137 52 7e-08
AT1G28480.1 | chr1:10013634-10014047 REVERSE LENGTH=138 49 7e-07
>AT5G63030.1 | chr5:25286352-25287517 FORWARD LENGTH=126
Length = 125
Score = 142 bits (359), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 65/94 (69%), Positives = 76/94 (80%)
Query: 5 KAKETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWTGQ 64
KAKE V++ PVVV+SK+YC +C RVK+L QLGATFK +ELD SDG E+QSAL+EWTGQ
Sbjct: 21 KAKEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLELDEMSDGGEIQSALSEWTGQ 80
Query: 65 RTVPNVFINGKHIGGCDDTLALNNEGKLVPLLTE 98
TVPNVFI G HIGGCD + N +GKLVPLLTE
Sbjct: 81 TTVPNVFIKGNHIGGCDRVMETNKQGKLVPLLTE 114
>AT5G40370.2 | chr5:16147826-16148900 REVERSE LENGTH=137
Length = 136
Score = 136 bits (343), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 61/80 (76%), Positives = 70/80 (87%)
Query: 19 SKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWTGQRTVPNVFINGKHIG 78
SK+YCP+CVRVK+L +QLGA FKA+ELD ESDGS++QS LAEWTGQRTVPNVFI G HIG
Sbjct: 44 SKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAEWTGQRTVPNVFIGGNHIG 103
Query: 79 GCDDTLALNNEGKLVPLLTE 98
GCD T L+ +GKLVPLLTE
Sbjct: 104 GCDATSNLHKDGKLVPLLTE 123
>AT5G20500.1 | chr5:6938652-6939665 FORWARD LENGTH=136
Length = 135
Score = 100 bits (249), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 61/90 (67%)
Query: 7 KETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWTGQRT 66
K+T++S +V++SKSYCP+C + K +F +L +ELD DG +Q+AL E G+RT
Sbjct: 36 KKTISSHKIVIFSKSYCPYCKKAKSVFRELDQVPYVVELDEREDGWSIQTALGEIVGRRT 95
Query: 67 VPNVFINGKHIGGCDDTLALNNEGKLVPLL 96
VP VFINGKH+GG DDT+ G+L LL
Sbjct: 96 VPQVFINGKHLGGSDDTVDAYESGELAKLL 125
>AT1G77370.1 | chr1:29073916-29074642 FORWARD LENGTH=131
Length = 130
Score = 97.1 bits (240), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 60/94 (63%)
Query: 4 AKAKETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWTG 63
A + + S +V++SKSYCP+C+R K++F QL +ELD DG ++Q L E+ G
Sbjct: 35 AFVQNAILSNKIVIFSKSYCPYCLRSKRIFSQLKEEPFVVELDQREDGDQIQYELLEFVG 94
Query: 64 QRTVPNVFINGKHIGGCDDTLALNNEGKLVPLLT 97
+RTVP VF+NGKHIGG DD A G+L LL
Sbjct: 95 RRTVPQVFVNGKHIGGSDDLGAALESGQLQKLLA 128
>AT4G28730.1 | chr4:14199174-14200712 FORWARD LENGTH=175
Length = 174
Score = 94.0 bits (232), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Query: 7 KETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDG-ESDGSELQSALAEWTGQR 65
++TV VV+YSK++C +C VK LF++LG +ELD G +LQ L TGQ
Sbjct: 74 RKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLERLTGQH 133
Query: 66 TVPNVFINGKHIGGCDDTLALNNEGKLVPLLTE 98
TVPNVF+ GKHIGGC DT+ LN +G L +L E
Sbjct: 134 TVPNVFVCGKHIGGCTDTVKLNRKGDLELMLAE 166
>AT2G20270.2 | chr2:8738001-8739617 REVERSE LENGTH=207
Length = 206
Score = 90.1 bits (222), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 66/120 (55%), Gaps = 28/120 (23%)
Query: 7 KETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDG------------------- 47
K TVA PVVVYSK++C + +VK LF+ L +ELD
Sbjct: 79 KTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLVVELDQLVSLGKTSLPHDIGLKHLQ 138
Query: 48 ---------ESDGSELQSALAEWTGQRTVPNVFINGKHIGGCDDTLALNNEGKLVPLLTE 98
S+GS+LQ+ L + TGQ TVPNVFI GKHIGGC DTL L+N+G+L +L E
Sbjct: 139 KFWWFLAFPGSEGSQLQNVLEKITGQYTVPNVFIGGKHIGGCSDTLQLHNKGELEAILAE 198
>AT5G18600.1 | chr5:6183466-6183774 REVERSE LENGTH=103
Length = 102
Score = 64.7 bits (156), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 48/89 (53%)
Query: 8 ETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWTGQRTV 67
+ V PVV+YSKS C +K L GA ELD S G E++ AL V
Sbjct: 6 KMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLGCSPAV 65
Query: 68 PNVFINGKHIGGCDDTLALNNEGKLVPLL 96
P VFI G+ +GG ++ ++L+ G L+P+L
Sbjct: 66 PGVFIGGELVGGANEVMSLHLNGSLIPML 94
>AT4G15700.1 | chr4:8937545-8937853 FORWARD LENGTH=103
Length = 102
Score = 62.4 bits (150), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%)
Query: 7 KETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWTGQRT 66
++ ++ VV++SK+ C +K LF LG ELD S G E++ ALA+ T
Sbjct: 5 QKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLGCSPT 64
Query: 67 VPNVFINGKHIGGCDDTLALNNEGKLVPLL 96
VP VFI G+ +GG + ++L+ LVP+L
Sbjct: 65 VPVVFIGGQLVGGANQVMSLHLNRSLVPML 94
>AT3G62960.1 | chr3:23268780-23269088 FORWARD LENGTH=103
Length = 102
Score = 62.0 bits (149), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%)
Query: 15 VVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWTGQRTVPNVFING 74
VV+++KS C C V+ LF L E+D + D E++ AL VP VF++G
Sbjct: 13 VVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALVRLGCANAVPAVFVSG 72
Query: 75 KHIGGCDDTLALNNEGKLVPLL 96
K +G +D ++L+ G LVPL+
Sbjct: 73 KLVGSTNDVMSLHLSGSLVPLI 94
>AT4G15680.1 | chr4:8931813-8932121 FORWARD LENGTH=103
Length = 102
Score = 60.8 bits (146), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%)
Query: 3 LAKAKETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWT 62
+ K ++ ++ VV++SK+ C +K LF G ELD + G E++ ALA+
Sbjct: 1 MDKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLG 60
Query: 63 GQRTVPNVFINGKHIGGCDDTLALNNEGKLVPLL 96
TVP VFI G+ +GG + ++L+ LVP+L
Sbjct: 61 CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPML 94
>AT3G62950.1 | chr3:23266303-23266614 FORWARD LENGTH=104
Length = 103
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 3 LAKAKETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSAL-AEW 61
+ + ++ + V+++KS C C +K LF +LGA+ ELD + +G E++ AL A
Sbjct: 1 MERIRDLSSKKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPEGREMERALRALG 60
Query: 62 TGQRTVPNVFINGKHIGGCDDTLALNNEGKLVPLLTE 98
+ VP VF+ G++IG D ++ + +G L +L +
Sbjct: 61 SSNPAVPAVFVGGRYIGSAKDIISFHVDGSLKQMLKD 97
>AT4G15660.1 | chr4:8925928-8926236 FORWARD LENGTH=103
Length = 102
Score = 60.1 bits (144), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%)
Query: 3 LAKAKETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWT 62
+ K ++ ++ VV++S + C +K LF LG ELD + G E++ ALA+
Sbjct: 1 MEKIQKMISEKSVVIFSNNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEYALAQLG 60
Query: 63 GQRTVPNVFINGKHIGGCDDTLALNNEGKLVPLL 96
TVP VFI G+ +GG + ++L+ L+P+L
Sbjct: 61 CSPTVPVVFIGGQLVGGANQVMSLHLNRSLIPML 94
>AT4G15670.1 | chr4:8929237-8929545 FORWARD LENGTH=103
Length = 102
Score = 59.7 bits (143), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%)
Query: 3 LAKAKETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWT 62
+ K ++ + +V++SK+ C +K LF LG ELD + G E++ ALA+
Sbjct: 1 MEKLQKMTSEKSLVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEQALAQLG 60
Query: 63 GQRTVPNVFINGKHIGGCDDTLALNNEGKLVPLL 96
TVP VFI G+ +GG + ++L+ L+P+L
Sbjct: 61 CSPTVPVVFIGGQLVGGANQVMSLHLNRSLIPML 94
>AT2G47880.1 | chr2:19605124-19605432 FORWARD LENGTH=103
Length = 102
Score = 59.3 bits (142), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 15 VVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWTGQRTVPNVFING 74
VV+++KS C C V+ LF L E+D + D E++ AL VP VF+ G
Sbjct: 13 VVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALLRLGCSTAVPAVFVGG 72
Query: 75 KHIGGCDDTLALNNEGKLVPLL 96
K +G ++ ++L+ G LVPL+
Sbjct: 73 KLVGSTNEVMSLHLSGSLVPLI 94
>AT4G33040.1 | chr4:15940779-15941213 REVERSE LENGTH=145
Length = 144
Score = 58.9 bits (141), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 58/100 (58%), Gaps = 6/100 (6%)
Query: 4 AKAKETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALA-EWT 62
AK + ++ PV+++S+S C C +K+L +G IELD + + S L +AL E++
Sbjct: 40 AKIRRLISEHPVIIFSRSSCCMCHVMKRLLATIGVIPTVIELD-DHEVSSLPTALQDEYS 98
Query: 63 GQRTV----PNVFINGKHIGGCDDTLALNNEGKLVPLLTE 98
G +V P VFI + +GG + +AL+ G+LVP L +
Sbjct: 99 GGVSVVGPPPAVFIGRECVGGLESLVALHLSGQLVPKLVQ 138
>AT4G15690.1 | chr4:8934444-8934752 FORWARD LENGTH=103
Length = 102
Score = 58.9 bits (141), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%)
Query: 7 KETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWTGQRT 66
++ ++ VV++SK+ C +K LF G ELD + G E++ ALA+ T
Sbjct: 5 QKMISEKSVVIFSKNSCCMSHTIKTLFLDFGVNPTIYELDEINIGREIEQALAQLGCSPT 64
Query: 67 VPNVFINGKHIGGCDDTLALNNEGKLVPLL 96
VP VFI G+ +GG + ++L+ LVP+L
Sbjct: 65 VPVVFIGGQLVGGANQVMSLHLNRSLVPML 94
>AT3G62930.1 | chr3:23261538-23261846 REVERSE LENGTH=103
Length = 102
Score = 58.9 bits (141), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 3 LAKAKETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWT 62
+ + V PVV++SKS C ++ L GA ELD S+G E++ AL +
Sbjct: 1 MESVRSLVEDKPVVIFSKSSCCMSHSIQTLISGFGAKMTVYELDQFSNGQEIEKALVQMG 60
Query: 63 GQRTVPNVFINGKHIGGCDDTLALNNEGKLVPLL 96
+ +VP VFI + IGG + + L + +L +L
Sbjct: 61 CKPSVPAVFIGQQFIGGANQVMTLQVKNQLAAML 94
>AT2G47870.1 | chr2:19603339-19603650 FORWARD LENGTH=104
Length = 103
Score = 58.5 bits (140), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 3 LAKAKETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWT 62
+ + ++ + V+++KS C C +K LF +LGA+ ELD + G +++ AL
Sbjct: 1 MERVRDLASEKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPQGPDMERALFRVF 60
Query: 63 GQR-TVPNVFINGKHIGGCDDTLALNNEGKLVPLL 96
G VP VF+ G+++G D ++ + +G L +L
Sbjct: 61 GSNPAVPAVFVGGRYVGSAKDVISFHVDGSLKQML 95
>AT5G14070.1 | chr5:4541915-4542337 FORWARD LENGTH=141
Length = 140
Score = 58.2 bits (139), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 3 LAKAKETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWT 62
LAK + A VV++S S C C +K+LF +G + ELD G E+ AL
Sbjct: 31 LAKIESMAAENAVVIFSVSTCCMCHAIKRLFRGMGVSPAVHELDLLPYGVEIHRALLRLL 90
Query: 63 GQRT--------VPNVFINGKHIGGCDDTLALNNEGKLVPLLTE 98
G + +P VFI GK +G + +A + G LVPLL +
Sbjct: 91 GCSSGGATSPGALPVVFIGGKMVGAMERVMASHINGSLVPLLKD 134
>AT1G03020.1 | chr1:698207-698515 REVERSE LENGTH=103
Length = 102
Score = 58.2 bits (139), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%)
Query: 3 LAKAKETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWT 62
+ K + PVV++SK+ C +K L GA ELD S+G E++ AL E
Sbjct: 1 MEKISNLLEDKPVVIFSKTSCCMSHSIKSLISGYGANSTVYELDEMSNGPEIERALVELG 60
Query: 63 GQRTVPNVFINGKHIGGCDDTLALNNEGKLVPLL 96
+ TVP VFI + +GG + ++L +L LL
Sbjct: 61 CKPTVPAVFIGQELVGGANQLMSLQVRNQLASLL 94
>AT2G30540.1 | chr2:13011259-13011567 REVERSE LENGTH=103
Length = 102
Score = 57.4 bits (137), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 15 VVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWTGQRTVPNVFING 74
VV++SKS C V+ LF+ LG E+D + + E++ AL VP +F+ G
Sbjct: 13 VVIFSKSSCCMSYAVQVLFQDLGVHPTVHEIDKDPECREIEKALMRLGCSTPVPAIFVGG 72
Query: 75 KHIGGCDDTLALNNEGKLVPLL 96
K IG ++ ++L+ G LVPL+
Sbjct: 73 KLIGSTNEVMSLHLSGSLVPLV 94
>AT1G06830.1 | chr1:2097189-2097488 FORWARD LENGTH=100
Length = 99
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 15 VVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWTGQRTVPNVFING 74
VV+++KS C V+ LF+ LG K E+D + + E++ AL + VP VFI G
Sbjct: 13 VVIFTKSSCCLSYAVQVLFQDLGVNPKIHEIDKDPECREIEKALMRLGCSKPVPAVFIGG 72
Query: 75 KHIGGCDDTLALNNEGKLVPLL 96
K +G ++ ++++ LVPL+
Sbjct: 73 KLVGSTNEVMSMHLSSSLVPLV 94
>AT3G21460.1 | chr3:7557567-7557875 REVERSE LENGTH=103
Length = 102
Score = 56.6 bits (135), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%)
Query: 15 VVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWTGQRTVPNVFING 74
VV++SKS C +K+LF + G + +E+D + G +++ ALA TVP VF+ G
Sbjct: 13 VVIFSKSTCCMSHAIKRLFYEQGVSPAIVEIDQDMYGKDIEWALARLGCSPTVPAVFVGG 72
Query: 75 KHIGGCDDTLALNNEGKLVPLLTE 98
K +G + + L+ G L LL E
Sbjct: 73 KFVGTANTVMTLHLNGSLKILLKE 96
>AT3G02000.1 | chr3:332512-332922 REVERSE LENGTH=137
Length = 136
Score = 52.0 bits (123), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 2 ALAKAKETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEW 61
L + + + + VV++S S C C VK LF +G + ELD G ++Q AL
Sbjct: 28 GLLRIESLASESAVVIFSVSTCCMCHAVKGLFRGMGVSPAVHELDLHPYGGDIQRALIRL 87
Query: 62 TGQRTVPN------VFINGKHIGGCDDTLALNNEGKLVPLLTE 98
G + VFI GK +G D +A + G LVPLL +
Sbjct: 88 LGCSGSSSPGSLPVVFIGGKLVGAMDRVMASHINGSLVPLLKD 130
>AT1G28480.1 | chr1:10013634-10014047 REVERSE LENGTH=138
Length = 137
Score = 48.5 bits (114), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 5 KAKETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDG---SELQSALAEW 61
+ + V V+V + C C V++L LG +E+D E + SEL++ +
Sbjct: 34 RVRMVVEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVLEIDEEREDEVLSELENIGVQG 93
Query: 62 TGQRT-VPNVFINGKHIGGCDDTLALNNEGKLVPLLTE 98
G +P V++ G+ GG D +A + G+LVP+L E
Sbjct: 94 GGGTVKLPAVYVGGRLFGGLDRVMATHISGELVPILKE 131
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.133 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,102,559
Number of extensions: 74166
Number of successful extensions: 232
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 229
Number of HSP's successfully gapped: 25
Length of query: 112
Length of database: 11,106,569
Length adjustment: 81
Effective length of query: 31
Effective length of database: 8,885,873
Effective search space: 275462063
Effective search space used: 275462063
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 104 (44.7 bits)