Os04g0501500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : BTB domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0501500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : BTB domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.14 | 0.24 | 9.15 | -0.288 | 0.678 | 0.716 | -0.507 | -0.778 | -0.105 | 3.06 | 19.64 | 334 | -- | -- |
| 26.49 | 0.24 | 9.13 | -0.136 | 0.66 | 0.677 | -0.354 | -- | -0.0618 | 3.06 | 19.1 | 364 | -- | -- |
| 26.83 | 0.241 | 9.14 | -0.228 | 0.671 | 0.711 | -- | -0.451 | -0.0915 | 3.1 | 19.64 | 354 | -- | -- |
| 26.92 | 0.242 | 9.13 | -0.131 | 0.664 | 0.687 | -- | -- | -0.0612 | 3.08 | 19.28 | 360 | -- | -- |
| 37.05 | 0.284 | 9.14 | -0.219 | -- | 0.767 | -- | -0.179 | -0.0764 | -- | 16.4 | 1057 | -- | -- |
| 34.15 | 0.274 | 9.11 | 0.0202 | 0.482 | -- | -0.419 | -- | 0.0564 | 1.98 | -- | -- | -- | -- |
| 34.82 | 0.276 | 9.11 | 0.033 | 0.481 | -- | -- | -- | 0.059 | 1.89 | -- | -- | -- | -- |
| 37.13 | 0.284 | 9.14 | -0.187 | -- | 0.777 | -- | -- | -0.0726 | -- | 16.2 | 1062 | -- | -- |
| 27.33 | 0.243 | 9.13 | -- | 0.649 | 0.636 | -- | -- | -0.0462 | 3.04 | 19.5 | 361 | -- | -- |
| 48.77 | 0.326 | 9.11 | 0.0528 | -- | -- | -- | -- | 0.0701 | -- | -- | -- | -- | -- |
| 34.85 | 0.276 | 9.11 | -- | 0.481 | -- | -- | -- | 0.0554 | 1.9 | -- | -- | -- | -- |
| 37.94 | 0.287 | 9.13 | -- | -- | 0.696 | -- | -- | -0.0415 | -- | 16.5 | 1058 | -- | -- |
| 48.84 | 0.326 | 9.11 | -- | -- | -- | -- | -- | 0.0643 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.77 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 4 | 25.99 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 6 | 20 |
| 5 | 26.01 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 10 | 26.19 | temperature | 25.0 | 270 | < th | dose independent | rect. | 6 | 20 |
| 12 | 26.21 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 15 | 26.31 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 9 | 18 |
| 16 | 26.33 | temperature | 20.0 | 270 | > th | dose dependent | no | NA | NA |
| 17 | 26.33 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 2 | 23 |
| 19 | 26.36 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 21 | 26.37 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 22 | 26.38 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 8 | 19 |
| 25 | 26.40 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 30 | 26.46 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 33 | 26.47 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 2 | 6 |
| 37 | 26.48 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 2 | 6 |
| 108 | 26.61 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 119 | 26.61 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 19 | 19 |
| 170 | 26.67 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 390 | 26.86 | temperature | 15.0 | 1440 | > th | dose dependent | sin | 9 | NA |
| 410 | 26.87 | temperature | 30.0 | 1440 | < th | dose dependent | sin | 9 | NA |
| 771 | 27.05 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 774 | 27.05 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 1 |