Os04g0498900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0498900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.15 | 0.221 | 10.7 | -0.279 | 0.035 | 0.296 | -0.0832 | 0.657 | 0.307 | 13.3 | 65 | 6011 | -- | -- |
| 22.57 | 0.221 | 10.7 | -0.286 | 0.0651 | 0.302 | -0.137 | -- | 0.349 | 13.9 | 69.31 | 6171 | -- | -- |
| 22.18 | 0.219 | 10.7 | -0.281 | 0.0353 | 0.292 | -- | 0.663 | 0.306 | 12.9 | 65 | 6000 | -- | -- |
| 22.55 | 0.221 | 10.7 | -0.279 | 0.051 | 0.332 | -- | -- | 0.358 | 14.5 | 69.24 | 6161 | -- | -- |
| 22.25 | 0.22 | 10.7 | -0.28 | -- | 0.283 | -- | 0.677 | 0.306 | -- | 65.2 | 5941 | -- | -- |
| 24.14 | 0.23 | 10.7 | -0.257 | 0.0363 | -- | -0.0542 | -- | 0.321 | 13 | -- | -- | -- | -- |
| 24.16 | 0.23 | 10.7 | -0.259 | 0.0364 | -- | -- | -- | 0.32 | 12.7 | -- | -- | -- | -- |
| 22.72 | 0.222 | 10.7 | -0.278 | -- | 0.329 | -- | -- | 0.357 | -- | 69.48 | 6029 | -- | -- |
| 24.55 | 0.231 | 10.7 | -- | 0.0524 | 0.31 | -- | -- | 0.386 | 13.7 | 69.19 | 6003 | -- | -- |
| 24.24 | 0.23 | 10.7 | -0.26 | -- | -- | -- | -- | 0.32 | -- | -- | -- | -- | -- |
| 25.92 | 0.238 | 10.7 | -- | 0.0405 | -- | -- | -- | 0.349 | 13 | -- | -- | -- | -- |
| 24.71 | 0.232 | 10.7 | -- | -- | 0.302 | -- | -- | 0.384 | -- | 69.19 | 6001 | -- | -- |
| 26.02 | 0.238 | 10.7 | -- | -- | -- | -- | -- | 0.348 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.81 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 9 |
| 6 | 20.93 | wind | 1.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 7 | 20.96 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 9 |
| 8 | 20.98 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 9 |
| 10 | 20.98 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 9 |
| 14 | 21.02 | wind | 1.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 19 | 21.06 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 7 |
| 21 | 21.06 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 2 |
| 22 | 21.06 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 7 |
| 44 | 21.22 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 14 |
| 45 | 21.22 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 14 |
| 48 | 21.22 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 14 |
| 51 | 21.24 | wind | 1.0 | 1440 | < th | dose independent | rect. | 12 | 7 |
| 59 | 21.28 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 7 |
| 60 | 21.29 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 4 | NA |
| 73 | 21.34 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 3 | NA |
| 74 | 21.34 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 3 | NA |
| 77 | 21.34 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 3 | NA |
| 100 | 21.41 | wind | 1.0 | 1440 | > th | dose independent | rect. | 12 | 7 |
| 125 | 21.45 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 9 |
| 184 | 21.53 | radiation | 40.0 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 310 | 21.69 | radiation | 40.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 349 | 21.72 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 355 | 21.72 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 377 | 21.76 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 6 |
| 397 | 21.78 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 407 | 21.79 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 2 | 18 |
| 437 | 21.84 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 465 | 21.85 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 471 | 21.86 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 479 | 21.86 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 498 | 21.89 | temperature | 25.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 512 | 21.90 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 14 | 17 |
| 513 | 21.91 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 520 | 21.91 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 15 | 17 |
| 525 | 21.92 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 530 | 21.92 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 566 | 21.95 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 570 | 21.95 | temperature | 25.0 | 270 | < th | dose independent | rect. | 13 | 17 |
| 573 | 21.95 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 19 | 1 |
| 579 | 21.96 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 4 | 6 |
| 602 | 21.98 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 15 | 3 |
| 635 | 22.00 | temperature | 25.0 | 720 | > th | dose independent | rect. | 16 | 3 |
| 682 | 22.03 | wind | 5.0 | 270 | < th | dose independent | rect. | 16 | 9 |
| 688 | 22.03 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 689 | 22.03 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 706 | 22.04 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 4 |
| 707 | 22.04 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 5 |
| 780 | 22.07 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 20 | 7 |
| 796 | 22.08 | wind | 1.0 | 1440 | < th | dose independent | rect. | 12 | 13 |
| 798 | 22.08 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 19 |
| 819 | 22.09 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 2 | 8 |
| 822 | 22.09 | wind | 1.0 | 1440 | < th | dose independent | rect. | 10 | 15 |
| 823 | 22.09 | humidity | 50.0 | 270 | > th | dose independent | rect. | 12 | 18 |
| 847 | 22.10 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 18 | 9 |
| 851 | 22.11 | wind | 1.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 899 | 22.13 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 910 | 22.14 | wind | 1.0 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 961 | 22.15 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 22 |
| 963 | 22.16 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 988 | 22.16 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 9 |