Os04g0496600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0496600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.84 | 0.257 | 10.4 | -0.783 | 0.00682 | 1.26 | 0.133 | -0.853 | -0.136 | 23.9 | 15.18 | 593 | -- | -- |
| 30.38 | 0.257 | 10.4 | -0.636 | 0.0103 | 1.25 | 0.0687 | -- | -0.102 | 0.495 | 15.1 | 586 | -- | -- |
| 29.76 | 0.254 | 10.4 | -0.778 | 0.0717 | 1.26 | -- | -0.797 | -0.136 | 3.78 | 16.06 | 531 | -- | -- |
| 30.33 | 0.257 | 10.4 | -0.636 | 0.0689 | 1.23 | -- | -- | -0.0994 | 3.45 | 15.95 | 535 | -- | -- |
| 29.79 | 0.254 | 10.4 | -0.793 | -- | 1.19 | -- | -0.864 | -0.137 | -- | 16.4 | 593 | -- | -- |
| 50.23 | 0.332 | 10.3 | -0.333 | 0.317 | -- | 0.113 | -- | 0.097 | 19.6 | -- | -- | -- | -- |
| 50.27 | 0.332 | 10.3 | -0.335 | 0.317 | -- | -- | -- | 0.0972 | 19.6 | -- | -- | -- | -- |
| 30.38 | 0.257 | 10.4 | -0.634 | -- | 1.22 | -- | -- | -0.095 | -- | 15.61 | 594 | -- | -- |
| 39.75 | 0.294 | 10.3 | -- | 0.0976 | 0.983 | -- | -- | 0.00333 | 23.2 | 15.84 | 464 | -- | -- |
| 55.66 | 0.349 | 10.3 | -0.34 | -- | -- | -- | -- | 0.0924 | -- | -- | -- | -- | -- |
| 53.23 | 0.341 | 10.3 | -- | 0.32 | -- | -- | -- | 0.134 | 19.5 | -- | -- | -- | -- |
| 39.97 | 0.294 | 10.3 | -- | -- | 0.945 | -- | -- | 0.00294 | -- | 17 | 543 | -- | -- |
| 58.7 | 0.358 | 10.3 | -- | -- | -- | -- | -- | 0.13 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.89 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 15 |
| 5 | 27.36 | temperature | 20 | 720 | > th | dose dependent | sin | 9 | NA |
| 8 | 27.54 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 15 |
| 12 | 27.73 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 75 | 28.50 | temperature | 30 | 720 | < th | dose dependent | sin | 9 | NA |
| 141 | 29.11 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 10 |
| 151 | 29.16 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 354 | 29.80 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 464 | 29.96 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 471 | 29.97 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 564 | 30.07 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 21 |
| 565 | 30.07 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 598 | 30.10 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 21 |
| 670 | 30.18 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 772 | 30.26 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 781 | 30.26 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 802 | 30.27 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 921 | 30.35 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 956 | 30.38 | temperature | 30 | 1440 | < th | dose dependent | rect. | 2 | 7 |