Os04g0483000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ubiquitin domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0483000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Ubiquitin domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 40.29 | 0.298 | 3.29 | 0.206 | 0.212 | 0.264 | -0.203 | 1.29 | -0.0656 | 7.38 | 91.66 | 5912 | -- | -- |
| 42.36 | 0.303 | 3.29 | 0.116 | 0.245 | 0.336 | -0.253 | -- | -0.102 | 7.12 | 92 | 4787 | -- | -- |
| 40.39 | 0.296 | 3.29 | 0.203 | 0.212 | 0.261 | -- | 1.29 | -0.0641 | 7.63 | 92 | 5914 | -- | -- |
| 42.5 | 0.304 | 3.29 | 0.111 | 0.247 | 0.337 | -- | -- | -0.109 | 7.34 | 127.7 | 4792 | -- | -- |
| 42.76 | 0.305 | 3.29 | 0.203 | -- | 0.266 | -- | 1.28 | -0.0619 | -- | 91.25 | 5850 | -- | -- |
| 43.83 | 0.31 | 3.27 | 0.096 | 0.21 | -- | -0.226 | -- | -0.0312 | 7.29 | -- | -- | -- | -- |
| 43.95 | 0.31 | 3.27 | 0.0918 | 0.209 | -- | -- | -- | -0.0304 | 7.59 | -- | -- | -- | -- |
| 45 | 0.312 | 3.29 | 0.13 | -- | 0.294 | -- | -- | -0.0905 | -- | 93 | 7145 | -- | -- |
| 42.82 | 0.305 | 3.29 | -- | 0.246 | 0.325 | -- | -- | -0.118 | 7.32 | 116.2 | 4789 | -- | -- |
| 46.29 | 0.318 | 3.27 | 0.0947 | -- | -- | -- | -- | -0.0272 | -- | -- | -- | -- | -- |
| 44.17 | 0.311 | 3.27 | -- | 0.21 | -- | -- | -- | -0.0406 | 7.56 | -- | -- | -- | -- |
| 45.43 | 0.314 | 3.29 | -- | -- | 0.281 | -- | -- | -0.102 | -- | 123.2 | 5727 | -- | -- |
| 46.53 | 0.318 | 3.28 | -- | -- | -- | -- | -- | -0.0377 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.60 | humidity | 80 | 14400 | < th | dose dependent | rect. | 3 | 6 |
| 9 | 40.04 | humidity | 80 | 14400 | < th | dose dependent | rect. | 23 | 11 |
| 16 | 40.15 | humidity | 70 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 17 | 40.15 | humidity | 70 | 14400 | > th | dose independent | rect. | 6 | 4 |
| 40 | 40.17 | humidity | 70 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 43 | 40.20 | humidity | 70 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 45 | 40.21 | humidity | 80 | 10 | < th | dose independent | rect. | 5 | 3 |
| 47 | 40.21 | humidity | 80 | 10 | < th | dose independent | rect. | 23 | 9 |
| 48 | 40.23 | radiation | 10 | 30 | > th | dose independent | rect. | 7 | 1 |
| 52 | 40.25 | humidity | 70 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 53 | 40.25 | humidity | 80 | 4320 | > th | dose independent | rect. | 7 | 6 |
| 57 | 40.26 | humidity | 80 | 4320 | < th | dose independent | rect. | 7 | 6 |
| 69 | 40.29 | humidity | 50 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 76 | 40.31 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 3 | 23 |
| 90 | 40.35 | humidity | 70 | 4320 | > th | dose independent | rect. | 4 | 11 |
| 101 | 40.35 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 114 | 40.36 | humidity | 90 | 4320 | < th | dose dependent | rect. | 11 | 1 |
| 116 | 40.36 | humidity | 70 | 4320 | > th | dose dependent | rect. | 7 | 7 |
| 117 | 40.36 | humidity | 70 | 4320 | > th | dose dependent | rect. | 5 | 8 |
| 139 | 40.38 | humidity | 50 | 4320 | > th | dose dependent | rect. | 3 | 11 |
| 162 | 40.41 | humidity | 70 | 4320 | > th | dose independent | sin | 4 | NA |
| 172 | 40.42 | humidity | 80 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 221 | 40.45 | humidity | 90 | 4320 | < th | dose dependent | rect. | 4 | 11 |
| 272 | 40.48 | humidity | 50 | 4320 | > th | dose dependent | sin | 4 | NA |
| 288 | 40.48 | humidity | 90 | 4320 | < th | dose dependent | rect. | 23 | 16 |
| 306 | 40.49 | humidity | 50 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 388 | 40.52 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 2 | 2 |
| 405 | 40.53 | humidity | 90 | 4320 | < th | dose dependent | sin | 4 | NA |
| 419 | 40.54 | humidity | 70 | 4320 | < th | dose independent | sin | 5 | NA |
| 539 | 40.58 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 583 | 40.60 | humidity | 90 | 90 | < th | dose independent | rect. | 2 | 4 |
| 630 | 40.61 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 743 | 40.65 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 795 | 40.67 | humidity | 90 | 90 | < th | dose dependent | rect. | 2 | 5 |