Os04g0469000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heavy metal transport/detoxification protein domain containing protein.
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Os04g0469000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heavy metal transport/detoxification protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 266.37 | 0.767 | 13 | -1.91 | 0.734 | 1.52 | 0.175 | -3.46 | 0.0664 | 3.63 | 20 | 3433 | -- | -- |
| 282.18 | 0.782 | 12.9 | -1.52 | 0.685 | 2.26 | 0.256 | -- | 0.126 | 3.53 | 19.98 | 3921 | -- | -- |
| 266.46 | 0.76 | 13 | -1.92 | 0.734 | 1.52 | -- | -3.46 | 0.0658 | 3.61 | 20.04 | 3437 | -- | -- |
| 281.93 | 0.782 | 12.9 | -1.47 | 0.744 | 2.28 | -- | -- | 0.162 | 3.64 | 19.79 | 3907 | -- | -- |
| 294.26 | 0.799 | 13 | -2.01 | -- | 1.51 | -- | -3.6 | 0.0281 | -- | 20.51 | 3828 | -- | -- |
| 367 | 0.898 | 12.7 | -0.136 | 0.765 | -- | 0.0317 | -- | 0.755 | 3.42 | -- | -- | -- | -- |
| 367 | 0.897 | 12.7 | -0.136 | 0.765 | -- | -- | -- | 0.754 | 3.42 | -- | -- | -- | -- |
| 296.05 | 0.801 | 12.9 | -2.72 | -- | 2.84 | -- | -- | -0.069 | -- | 18.7 | 21263 | -- | -- |
| 318.44 | 0.831 | 12.8 | -- | 0.696 | 1.24 | -- | -- | 0.491 | 3.09 | 20.8 | 4113 | -- | -- |
| 399.9 | 0.934 | 12.7 | -0.104 | -- | -- | -- | -- | 0.775 | -- | -- | -- | -- | -- |
| 367.49 | 0.897 | 12.7 | -- | 0.763 | -- | -- | -- | 0.77 | 3.42 | -- | -- | -- | -- |
| 335.76 | 0.853 | 12.8 | -- | -- | 1.87 | -- | -- | 0.534 | -- | 18.49 | 2729 | -- | -- |
| 400.18 | 0.934 | 12.7 | -- | -- | -- | -- | -- | 0.786 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 255.65 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 24 | 18 |
| 3 | 256.08 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 17 | 257.58 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 34 | 260.02 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 4 | NA |
| 37 | 260.37 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 51 | 261.17 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 54 | 261.26 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 59 | 261.53 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 62 | 261.73 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 17 |
| 69 | 262.21 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 84 | 263.16 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 5 |
| 93 | 263.78 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 95 | 263.80 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 104 | 264.13 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 112 | 264.40 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 113 | 264.42 | atmosphere | 1015.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 118 | 264.57 | atmosphere | 1015.0 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 146 | 265.13 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 147 | 265.13 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 11 | 20 |
| 149 | 265.15 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 150 | 265.15 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 6 |
| 151 | 265.15 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 15 | 6 |
| 159 | 265.29 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 179 | 265.61 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 188 | 265.79 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 198 | 265.93 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 21 |
| 212 | 266.07 | wind | 3.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 221 | 266.17 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 233 | 266.27 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 240 | 266.37 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 8 |
| 242 | 266.40 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 264 | 266.59 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 265 | 266.61 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 272 | 266.74 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 275 | 266.76 | wind | 9.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 295 | 267.00 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 10 |
| 301 | 267.05 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 23 | 17 |
| 308 | 267.16 | wind | 3.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 318 | 267.25 | atmosphere | 1010.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 321 | 267.30 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 335 | 267.42 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 22 |
| 343 | 267.51 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 4 |
| 345 | 267.54 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 5 |
| 352 | 267.56 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 353 | 267.56 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 366 | 267.68 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 373 | 267.72 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 384 | 267.78 | atmosphere | 1010.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 389 | 267.83 | atmosphere | 1015.0 | 43200 | > th | dose dependent | sin | 16 | NA |
| 395 | 267.94 | atmosphere | 1010.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 403 | 267.97 | atmosphere | 1010.0 | 43200 | > th | dose dependent | rect. | 12 | 18 |
| 427 | 268.03 | atmosphere | 1010.0 | 43200 | > th | dose dependent | rect. | 23 | 7 |
| 457 | 268.07 | atmosphere | 1010.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 465 | 268.08 | atmosphere | 1010.0 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 506 | 268.12 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 6 | 10 |
| 507 | 268.12 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 6 | 10 |
| 532 | 268.14 | atmosphere | 1010.0 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 603 | 268.22 | atmosphere | 1010.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 675 | 268.29 | atmosphere | 1010.0 | 43200 | > th | dose dependent | rect. | 19 | 20 |
| 677 | 268.29 | atmosphere | 1010.0 | 43200 | > th | dose dependent | rect. | 17 | 22 |
| 681 | 268.30 | atmosphere | 1010.0 | 43200 | > th | dose dependent | no | NA | NA |
| 692 | 268.30 | atmosphere | 1010.0 | 43200 | > th | dose dependent | rect. | 5 | 23 |
| 707 | 268.31 | atmosphere | 1010.0 | 43200 | > th | dose dependent | rect. | 23 | 23 |
| 718 | 268.32 | atmosphere | 1010.0 | 43200 | > th | dose dependent | rect. | 1 | 23 |
| 719 | 268.32 | atmosphere | 1010.0 | 43200 | > th | dose dependent | rect. | 3 | 23 |
| 733 | 268.34 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 780 | 268.38 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 808 | 268.40 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 17 | 10 |
| 892 | 268.52 | atmosphere | 1010.0 | 43200 | > th | dose independent | rect. | 14 | 4 |
| 933 | 268.59 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 960 | 268.64 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 1000 | 268.72 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 7 |