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Os04g0467100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10 (0.0153) R2 : 0.424
β1 : 1.01 (0.0562) R2dD : 0.42 R2D : 0.335
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.238 (0.0328) R2dN8 : 0.0892 R2N8 : 0.00428
σ : 0.288
deviance : 38.03
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.55 0.218 9.91 1.42 0.349 0.501 -0.566 2.46 0.316 10.3 14.8 5535 -- --
22.93 0.223 9.98 0.935 0.365 0.408 -0.573 -- 0.26 9.82 31.45 6236 -- --
22.75 0.222 9.91 1.42 0.36 0.509 -- 2.56 0.325 10.2 14.5 5393 -- --
23.76 0.227 9.98 0.886 0.396 0.522 -- -- 0.318 9.58 30.7 1802 -- --
30.28 0.256 9.93 1.37 -- 0.509 -- 2.46 0.309 -- 13.55 5699 -- --
29.85 0.256 9.99 1.03 0.329 -- -0.62 -- 0.24 10.1 -- -- -- --
31.34 0.262 10 1.01 0.334 -- -- -- 0.238 9.86 -- -- -- --
31.21 0.26 9.99 0.906 -- 0.364 -- -- 0.302 -- 30.9 5628 -- --
43.19 0.306 10 -- 0.434 0.671 -- -- 0.0997 9.79 25.76 2115 -- --
38.03 0.288 10 1.01 -- -- -- -- 0.238 -- -- -- -- --
58.21 0.357 10 -- 0.332 -- -- -- 0.125 9.63 -- -- -- --
32.39 0.265 10.1 -- -- 0.84 -- -- -0.184 -- 20.5 47520 -- --
64.73 0.376 10 -- -- -- -- -- 0.126 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.43 temperature 10.0 90 > th dose dependent rect. 15 18
3 20.66 wind 7.0 43200 < th dose independent rect. 3 8
5 20.68 wind 1.0 43200 > th dose independent rect. 17 1
7 20.71 wind 7.0 43200 > th dose independent rect. 3 8
10 20.75 wind 7.0 43200 < th dose independent rect. 24 11
15 20.80 wind 7.0 43200 > th dose independent rect. 24 11
21 20.87 wind 5.0 43200 > th dose dependent rect. 24 12
25 20.91 temperature 15.0 10 > th dose dependent rect. 15 18
29 20.94 wind 5.0 43200 > th dose dependent rect. 2 10
38 21.00 precipitation 0.1 43200 < th dose independent rect. 6 3
39 21.00 precipitation 0.1 43200 < th dose dependent rect. 6 3
43 21.02 wind 1.0 43200 > th dose independent rect. 15 8
56 21.09 wind 1.0 43200 > th dose independent rect. 13 11
61 21.11 precipitation 0.1 43200 < th dose independent rect. 6 1
62 21.11 precipitation 0.1 43200 < th dose dependent rect. 6 1
69 21.14 temperature 20.0 43200 < th dose independent rect. 5 8
71 21.14 radiation 20.0 270 < th dose dependent rect. 16 11
73 21.15 temperature 20.0 43200 < th dose independent rect. 6 3
74 21.15 temperature 20.0 43200 > th dose independent rect. 6 4
79 21.15 temperature 20.0 43200 > th dose independent rect. 5 8
81 21.16 radiation 1.0 43200 < th dose independent rect. 6 1
89 21.17 radiation 1.0 43200 > th dose independent rect. 6 1
92 21.17 precipitation 0.1 43200 < th dose independent rect. 5 5
94 21.17 radiation 1.0 43200 < th dose dependent rect. 6 1
95 21.17 precipitation 0.1 43200 < th dose dependent rect. 5 5
97 21.18 precipitation 0.1 43200 > th dose independent rect. 6 1
102 21.18 temperature 30.0 90 < th dose independent rect. 17 10
103 21.18 precipitation 0.1 43200 > th dose dependent rect. 6 1
104 21.18 temperature 25.0 43200 < th dose dependent rect. 7 6
110 21.19 temperature 25.0 43200 < th dose dependent rect. 9 1
111 21.19 temperature 25.0 43200 < th dose dependent rect. 8 3
118 21.20 wind 1.0 43200 < th dose independent rect. 15 8
119 21.20 wind 1.0 43200 < th dose independent rect. 13 10
132 21.22 temperature 20.0 43200 > th dose independent sin 1 NA
134 21.22 temperature 20.0 43200 < th dose independent sin 1 NA
152 21.23 precipitation 0.1 43200 > th dose independent rect. 6 3
159 21.23 temperature 20.0 43200 > th dose independent rect. 5 15
161 21.23 precipitation 0.1 43200 > th dose dependent rect. 6 3
163 21.23 temperature 10.0 270 > th dose dependent rect. 12 20
164 21.24 wind 1.0 43200 < th dose independent rect. 17 1
165 21.24 temperature 20.0 43200 > th dose independent rect. 8 1
166 21.24 temperature 20.0 43200 < th dose independent rect. 8 1
176 21.24 temperature 20.0 43200 > th dose independent rect. 1 19
233 21.26 temperature 20.0 43200 > th dose independent rect. 2 11
353 21.27 temperature 20.0 43200 > th dose independent rect. 5 22
358 21.27 temperature 20.0 43200 < th dose independent rect. 5 22
383 21.28 temperature 20.0 43200 > th dose independent no NA NA
385 21.28 temperature 20.0 43200 < th dose independent no NA NA
386 21.28 temperature 20.0 43200 > th dose independent rect. 2 1
396 21.28 radiation 10.0 270 < th dose independent rect. 16 11
426 21.28 temperature 20.0 43200 < th dose independent rect. 17 19
430 21.28 temperature 20.0 43200 > th dose independent rect. 17 20
543 21.29 temperature 20.0 43200 > th dose independent rect. 11 23
549 21.29 temperature 20.0 43200 < th dose independent rect. 10 23
554 21.29 temperature 25.0 43200 < th dose dependent sin 23 NA
559 21.29 wind 1.0 43200 < th dose dependent rect. 16 5
624 21.31 radiation 1.0 43200 > th dose independent rect. 6 4
628 21.31 radiation 1.0 43200 < th dose independent rect. 6 7
675 21.32 radiation 1.0 43200 < th dose independent rect. 6 4
676 21.32 precipitation 0.1 43200 > th dose independent rect. 5 5
677 21.32 wind 1.0 43200 > th dose independent rect. 16 6
679 21.32 radiation 1.0 43200 > th dose independent rect. 6 7
725 21.33 temperature 20.0 43200 < th dose independent rect. 1 2
730 21.33 wind 1.0 43200 < th dose independent rect. 16 5
834 21.35 precipitation 0.1 43200 > th dose dependent rect. 5 5
845 21.36 temperature 20.0 43200 < th dose independent rect. 23 1
893 21.37 temperature 20.0 43200 < th dose independent rect. 23 4
898 21.37 radiation 1.0 43200 > th dose independent rect. 6 11
899 21.37 radiation 1.0 43200 < th dose independent rect. 6 11
928 21.37 radiation 1.0 14400 < th dose dependent rect. 18 20
956 21.38 temperature 25.0 43200 < th dose dependent rect. 17 3
964 21.38 radiation 1.0 14400 < th dose dependent rect. 18 18
993 21.39 temperature 25.0 43200 < th dose dependent rect. 18 1