Os04g0457700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0457700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 87.7 | 0.44 | 2.94 | -0.0604 | 0.111 | 0.084 | -0.0952 | 1.13 | 0.0279 | 9.52 | 48 | 2204 | -- | -- |
| 87.99 | 0.437 | 2.95 | -0.101 | 0.114 | 0.54 | -0.133 | -- | 0.0263 | 9.49 | 47.43 | 2163 | -- | -- |
| 87.73 | 0.436 | 2.94 | -0.0641 | 0.111 | 0.0863 | -- | 1.15 | 0.028 | 9.82 | 48.07 | 2181 | -- | -- |
| 88.05 | 0.437 | 2.95 | -0.107 | 0.114 | 0.547 | -- | -- | 0.0264 | 9.78 | 47.4 | 2149 | -- | -- |
| 88.44 | 0.438 | 2.94 | -0.0522 | -- | 0.0045 | -- | 1.3 | 0.0251 | -- | 48.98 | 2203 | -- | -- |
| 90.38 | 0.446 | 2.96 | -0.0134 | 0.0985 | -- | -0.209 | -- | 0.0141 | 9.1 | -- | -- | -- | -- |
| 90.53 | 0.446 | 2.96 | -0.0204 | 0.0988 | -- | -- | -- | 0.0142 | 9.45 | -- | -- | -- | -- |
| 88.82 | 0.439 | 2.96 | -0.105 | -- | 0.522 | -- | -- | 0.0261 | -- | 47.21 | 2176 | -- | -- |
| 88.33 | 0.438 | 2.95 | -- | 0.113 | 0.497 | -- | -- | 0.0363 | 9.82 | 47.23 | 2141 | -- | -- |
| 91.1 | 0.446 | 2.96 | -0.021 | -- | -- | -- | -- | 0.0145 | -- | -- | -- | -- | -- |
| 90.54 | 0.445 | 2.96 | -- | 0.0988 | -- | -- | -- | 0.0164 | 9.47 | -- | -- | -- | -- |
| 89.09 | 0.44 | 2.95 | -- | -- | 0.474 | -- | -- | 0.0356 | -- | 47.28 | 2152 | -- | -- |
| 91.11 | 0.446 | 2.96 | -- | -- | -- | -- | -- | 0.0168 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 81.89 | humidity | 70.0 | 30 | < th | dose independent | rect. | 19 | 1 |
| 13 | 82.14 | wind | 1.0 | 90 | < th | dose dependent | rect. | 9 | 1 |
| 25 | 82.36 | humidity | 70.0 | 30 | < th | dose dependent | rect. | 19 | 1 |
| 38 | 82.54 | wind | 1.0 | 90 | < th | dose independent | rect. | 8 | 2 |
| 74 | 83.37 | atmosphere | 1010.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 75 | 83.37 | atmosphere | 1010.0 | 10 | > th | dose independent | rect. | 9 | 1 |
| 159 | 83.85 | temperature | 30.0 | 90 | > th | dose independent | rect. | 18 | 1 |
| 173 | 84.01 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 18 | 1 |
| 187 | 84.06 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 204 | 84.07 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 221 | 84.19 | wind | 1.0 | 10 | < th | dose dependent | rect. | 1 | 2 |
| 247 | 85.25 | wind | 7.0 | 10 | > th | dose independent | rect. | 12 | 1 |
| 254 | 85.47 | wind | 1.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 267 | 85.55 | wind | 1.0 | 10 | < th | dose independent | rect. | 1 | 1 |
| 268 | 85.59 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 284 | 85.66 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 286 | 85.69 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 289 | 85.74 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 12 | 2 |
| 298 | 85.94 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 299 | 85.95 | radiation | 30.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 316 | 85.96 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 319 | 85.96 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 343 | 86.04 | radiation | 30.0 | 90 | > th | dose independent | sin | 11 | NA |
| 370 | 86.17 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 391 | 86.24 | wind | 1.0 | 720 | < th | dose dependent | rect. | 4 | 1 |
| 399 | 86.34 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 421 | 86.36 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 424 | 86.37 | wind | 1.0 | 270 | < th | dose independent | rect. | 6 | 4 |
| 428 | 86.38 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 431 | 86.39 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 433 | 86.39 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 434 | 86.39 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 438 | 86.39 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 440 | 86.39 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 445 | 86.39 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 446 | 86.39 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 447 | 86.39 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 452 | 86.39 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 453 | 86.41 | humidity | 70.0 | 10 | > th | dose independent | sin | 9 | NA |
| 457 | 86.42 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 15 |
| 459 | 86.43 | wind | 9.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 462 | 86.44 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 486 | 86.46 | wind | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 492 | 86.49 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 495 | 86.50 | radiation | 30.0 | 90 | < th | dose independent | sin | 10 | NA |
| 506 | 86.60 | temperature | 25.0 | 30 | > th | dose independent | rect. | 8 | 2 |
| 573 | 86.69 | radiation | 20.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 574 | 86.70 | wind | 1.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 641 | 86.75 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 650 | 86.80 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 673 | 86.85 | atmosphere | 1010.0 | 90 | > th | dose independent | sin | 5 | NA |
| 688 | 86.88 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 9 | 2 |
| 707 | 86.93 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 708 | 86.93 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 711 | 86.93 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 715 | 86.93 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 724 | 86.93 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 725 | 86.93 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 746 | 86.93 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 749 | 86.93 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 9 | 1 |
| 750 | 86.93 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 757 | 86.94 | humidity | 70.0 | 90 | < th | dose independent | rect. | 18 | 18 |
| 787 | 86.96 | atmosphere | 1010.0 | 10 | > th | dose independent | sin | 4 | NA |
| 794 | 86.97 | atmosphere | 1010.0 | 90 | < th | dose independent | sin | 4 | NA |
| 797 | 86.97 | radiation | 20.0 | 90 | > th | dose dependent | sin | 11 | NA |
| 832 | 86.99 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 12 | 2 |
| 906 | 87.03 | wind | 1.0 | 270 | < th | dose dependent | rect. | 6 | 4 |
| 934 | 87.05 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 21 | 22 |
| 937 | 87.06 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 977 | 87.08 | radiation | 20.0 | 90 | < th | dose independent | rect. | 21 | 14 |
| 980 | 87.09 | temperature | 25.0 | 30 | > th | dose independent | rect. | 6 | 4 |