Os04g0450600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0450600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 210.82 | 0.682 | 8.4 | -2.06 | 1.07 | -1.21 | 1.74 | -1.34 | -0.459 | 2.06 | 26.18 | 4581 | -- | -- |
| 211.81 | 0.678 | 8.36 | -1.71 | 1.05 | -1.27 | 1.77 | -- | -0.397 | 1.96 | 26.5 | 4682 | -- | -- |
| 222.19 | 0.694 | 8.4 | -2.11 | 1.08 | -1.21 | -- | -1.34 | -0.471 | 2.2 | 26.1 | 4584 | -- | -- |
| 223.36 | 0.696 | 8.36 | -1.76 | 1.08 | -1.31 | -- | -- | -0.37 | 2.17 | 26.1 | 4582 | -- | -- |
| 253.37 | 0.745 | 8.38 | -2.31 | -- | -0.824 | -- | -1.49 | -0.436 | -- | 26.5 | 4694 | -- | -- |
| 256.57 | 0.751 | 8.4 | -2.2 | 1.06 | -- | 1.75 | -- | -0.584 | 2.16 | -- | -- | -- | -- |
| 267.96 | 0.767 | 8.41 | -2.25 | 1.06 | -- | -- | -- | -0.594 | 2.31 | -- | -- | -- | -- |
| 252.3 | 0.743 | 8.36 | -1.97 | -- | -0.964 | -- | -- | -0.412 | -- | 27.16 | 4722 | -- | -- |
| 243.78 | 0.727 | 8.19 | -- | 1.1 | -1.85 | -- | -- | 0.356 | 2.24 | 24 | 46040 | -- | -- |
| 335.19 | 0.855 | 8.4 | -2.2 | -- | -- | -- | -- | -0.568 | -- | -- | -- | -- | -- |
| 401.24 | 0.937 | 8.35 | -- | 1.02 | -- | -- | -- | -0.344 | 2.27 | -- | -- | -- | -- |
| 310.28 | 0.82 | 8.19 | -- | -- | -1.81 | -- | -- | 0.328 | -- | 22.33 | 46331 | -- | -- |
| 463.3 | 1 | 8.34 | -- | -- | -- | -- | -- | -0.324 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 200.56 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 3 | 203.30 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 4 |
| 5 | 204.68 | wind | 1 | 14400 | < th | dose independent | rect. | 1 | 4 |
| 7 | 205.50 | wind | 1 | 14400 | > th | dose independent | rect. | 22 | 8 |
| 11 | 206.55 | temperature | 20 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 13 | 206.64 | wind | 1 | 14400 | < th | dose independent | rect. | 22 | 8 |
| 15 | 207.06 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 20 | 207.27 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 30 | 207.54 | temperature | 30 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 46 | 207.95 | temperature | 25 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 47 | 207.95 | temperature | 25 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 49 | 207.99 | temperature | 30 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 61 | 208.21 | temperature | 25 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 66 | 208.28 | temperature | 20 | 14400 | > th | dose dependent | rect. | 6 | 9 |
| 70 | 208.31 | temperature | 25 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 71 | 208.31 | temperature | 30 | 14400 | < th | dose dependent | rect. | 13 | 5 |
| 120 | 208.59 | temperature | 20 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 127 | 208.63 | temperature | 20 | 14400 | > th | dose dependent | sin | 3 | NA |
| 138 | 208.67 | temperature | 30 | 14400 | < th | dose dependent | rect. | 6 | 12 |
| 260 | 209.00 | temperature | 30 | 14400 | < th | dose dependent | sin | 23 | NA |
| 452 | 209.32 | temperature | 25 | 14400 | > th | dose independent | rect. | 6 | 16 |
| 476 | 209.34 | temperature | 25 | 14400 | < th | dose independent | rect. | 6 | 16 |
| 545 | 209.39 | temperature | 20 | 14400 | > th | dose dependent | rect. | 13 | 23 |
| 548 | 209.40 | temperature | 20 | 14400 | > th | dose dependent | no | NA | NA |
| 621 | 209.49 | temperature | 25 | 14400 | > th | dose independent | rect. | 6 | 13 |