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Os04g0442800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Phragmoplast-associated kinesin-related protein 1 (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.6 (0.0249) R2 : 0.763
β1 : -0.814 (0.0914) R2dD : 0.0428 R2D : 0.0594
β2 : 2.35 (0.0645) R2dC : 0.692 R2C : 0.686
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.311 (0.0533) R2dN8 : 0.0237 R2N8 : 0.0216
σ : 0.469
deviance : 100.34
__
_____
C
peak time of C : 16.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
88.1 0.441 9.59 -0.799 2.54 -0.861 0.961 -0.753 0.328 16.2 10 55 -- --
88.89 0.439 9.59 -0.82 2.53 -0.812 0.725 -- 0.322 16.3 10 49 -- --
90.16 0.442 9.59 -0.802 2.54 -0.854 -- -0.295 0.327 16.2 10 49 -- --
90.34 0.443 9.59 -0.811 2.54 -0.836 -- -- 0.326 16.3 10 49 -- --
204.03 0.665 9.62 -0.974 -- 2.31 -- 0.517 0.069 -- -102.2 556 -- --
98.25 0.465 9.6 -0.818 2.34 -- 0.897 -- 0.306 16.8 -- -- -- --
100.34 0.469 9.6 -0.814 2.35 -- -- -- 0.311 16.8 -- -- -- --
204.41 0.666 9.62 -0.991 -- 2.32 -- -- 0.0608 -- -69.46 556 -- --
107.78 0.484 9.57 -- 2.54 -0.788 -- -- 0.41 16.3 9.991 48 -- --
392.59 0.926 9.58 -0.903 -- -- -- -- 0.25 -- -- -- -- --
117.82 0.508 9.58 -- 2.36 -- -- -- 0.401 16.7 -- -- -- --
230.23 0.707 9.59 -- -- 2.3 -- -- 0.174 -- -38.07 549 -- --
414.09 0.95 9.55 -- -- -- -- -- 0.35 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 79.11 humidity 50.0 10 > th dose dependent rect. 6 12
13 81.23 radiation 30.0 90 < th dose dependent rect. 6 11
15 81.44 radiation 20.0 10 < th dose independent rect. 6 9
18 81.53 radiation 20.0 10 < th dose independent rect. 6 20
28 82.33 radiation 20.0 90 < th dose dependent rect. 6 9
33 82.50 temperature 20.0 90 > th dose independent rect. 21 12
34 82.54 radiation 20.0 10 < th dose independent rect. 6 18
36 82.60 radiation 20.0 10 < th dose independent rect. 6 4
37 82.62 radiation 30.0 10 < th dose dependent rect. 6 8
39 82.69 radiation 40.0 10 < th dose dependent rect. 6 20
40 82.72 radiation 20.0 90 < th dose independent rect. 6 11
43 82.80 temperature 20.0 10 > th dose independent rect. 23 10
44 82.81 radiation 40.0 10 < th dose dependent rect. 6 4
45 82.87 temperature 20.0 270 > th dose independent rect. 12 12
49 83.04 temperature 20.0 10 > th dose independent rect. 21 12
56 83.15 temperature 10.0 90 > th dose dependent rect. 21 12
58 83.18 humidity 60.0 90 > th dose independent rect. 5 12
61 83.22 radiation 40.0 10 < th dose dependent rect. 6 11
62 83.23 radiation 30.0 90 < th dose dependent rect. 6 3
73 83.36 humidity 50.0 720 > th dose independent rect. 20 19
79 83.41 wind 5.0 90 < th dose independent rect. 9 21
80 83.41 atmosphere 995.0 90 > th dose dependent rect. 18 11
81 83.42 radiation 20.0 90 < th dose independent rect. 6 3
93 83.55 humidity 60.0 10 > th dose independent rect. 6 12
99 83.58 radiation 40.0 10 < th dose dependent rect. 6 18
128 83.95 humidity 70.0 10 > th dose independent rect. 6 4
146 84.14 atmosphere 1000.0 10 > th dose dependent rect. 18 12
147 84.15 temperature 30.0 10 < th dose dependent rect. 18 12
155 84.22 humidity 50.0 720 > th dose independent rect. 5 10
160 84.24 humidity 60.0 10 > th dose dependent rect. 6 4
168 84.30 wind 1.0 14400 > th dose independent rect. 1 1
189 84.50 wind 3.0 14400 < th dose dependent rect. 1 1
191 84.51 temperature 30.0 90 < th dose dependent rect. 18 11
192 84.53 wind 9.0 90 < th dose dependent rect. 9 21
233 84.89 radiation 30.0 720 < th dose independent rect. 20 13
236 84.92 wind 3.0 14400 < th dose dependent rect. 5 1
239 84.95 humidity 50.0 720 > th dose independent rect. 12 4
256 85.02 humidity 80.0 14400 > th dose independent rect. 6 1
267 85.10 temperature 20.0 30 > th dose independent rect. 14 19
278 85.14 temperature 10.0 720 > th dose dependent rect. 21 3
280 85.15 atmosphere 995.0 10 > th dose dependent rect. 6 3
297 85.24 radiation 20.0 720 < th dose independent rect. 21 11
301 85.26 radiation 40.0 30 < th dose independent rect. 6 13
305 85.29 wind 9.0 10 < th dose dependent rect. 9 21
309 85.33 temperature 20.0 90 > th dose independent rect. 12 21
311 85.34 wind 3.0 14400 < th dose dependent rect. 4 4
316 85.36 atmosphere 1005.0 10 > th dose independent rect. 6 3
337 85.47 humidity 80.0 1440 < th dose dependent rect. 9 2
338 85.47 radiation 30.0 720 < th dose dependent rect. 21 10
343 85.49 wind 1.0 30 > th dose independent rect. 6 3
347 85.50 radiation 40.0 10 < th dose independent rect. 6 18
373 85.59 wind 3.0 14400 < th dose dependent rect. 24 8
375 85.60 radiation 40.0 10 < th dose independent rect. 6 20
377 85.61 wind 9.0 43200 > th dose independent rect. 10 4
388 85.63 wind 3.0 14400 < th dose dependent rect. 22 10
398 85.68 precipitation 0.1 10 < th dose independent rect. 9 21
399 85.68 precipitation 0.1 10 < th dose dependent rect. 9 21
414 85.71 temperature 20.0 30 > th dose independent rect. 14 12
418 85.72 wind 1.0 43200 < th dose dependent rect. 12 1
419 85.72 humidity 90.0 30 < th dose dependent rect. 9 5
421 85.73 humidity 90.0 10 < th dose dependent rect. 9 7
427 85.75 wind 1.0 14400 < th dose independent rect. 1 1
434 85.78 wind 7.0 10 < th dose independent rect. 6 3
436 85.78 temperature 10.0 10 > th dose independent rect. 6 3
438 85.78 temperature 30.0 10 < th dose independent rect. 6 3
439 85.78 humidity 50.0 10 > th dose independent rect. 6 3
442 85.78 atmosphere 1015.0 10 < th dose independent rect. 6 3
443 85.78 temperature 10.0 10 > th dose independent rect. 9 21
454 85.81 wind 1.0 90 > th dose dependent rect. 5 4
458 85.82 wind 1.0 14400 > th dose dependent rect. 7 1
461 85.83 radiation 30.0 43200 < th dose independent rect. 11 1
489 85.88 wind 5.0 14400 < th dose dependent rect. 7 1
493 85.89 wind 1.0 14400 > th dose independent rect. 5 2
508 85.91 radiation 30.0 43200 > th dose independent rect. 11 1
511 85.92 wind 1.0 14400 > th dose dependent rect. 5 1
513 85.93 temperature 10.0 1440 > th dose independent rect. 7 3
516 85.93 atmosphere 995.0 1440 > th dose independent rect. 7 3
517 85.93 atmosphere 1015.0 1440 < th dose independent rect. 7 3
518 85.93 precipitation 0.1 10 < th dose independent rect. 6 3
519 85.93 temperature 10.0 1440 > th dose independent rect. 10 21
522 85.93 precipitation 0.1 10 < th dose dependent rect. 6 3
523 85.94 temperature 20.0 720 > th dose independent rect. 21 3
526 85.94 wind 1.0 14400 > th dose dependent rect. 4 5
527 85.95 humidity 80.0 14400 < th dose independent rect. 6 1
534 85.97 wind 9.0 43200 < th dose independent rect. 10 4
544 85.99 wind 1.0 14400 < th dose independent rect. 5 2
548 86.00 atmosphere 1015.0 720 < th dose independent rect. 21 2
558 86.03 atmosphere 1015.0 90 < th dose independent rect. 21 12
592 86.12 radiation 30.0 720 < th dose independent rect. 3 6
634 86.20 atmosphere 995.0 720 > th dose dependent rect. 17 2
641 86.21 temperature 30.0 30 < th dose dependent rect. 6 3
645 86.22 temperature 15.0 10 > th dose dependent rect. 23 10
654 86.24 humidity 50.0 1440 > th dose dependent rect. 9 3
681 86.30 wind 1.0 14400 > th dose independent rect. 4 6
693 86.32 humidity 50.0 14400 > th dose dependent rect. 5 1
698 86.32 radiation 1.0 10 > th dose dependent rect. 9 21
721 86.38 wind 3.0 14400 < th dose independent rect. 3 6
722 86.38 humidity 90.0 14400 < th dose dependent rect. 3 1
729 86.39 radiation 30.0 43200 > th dose dependent rect. 11 1
734 86.39 humidity 50.0 270 > th dose dependent rect. 3 12
739 86.40 humidity 90.0 4320 > th dose dependent rect. 7 1
760 86.44 precipitation 0.1 14400 < th dose independent rect. 14 2
764 86.44 precipitation 0.1 14400 < th dose dependent rect. 14 2
767 86.45 wind 1.0 10 > th dose dependent rect. 6 3
772 86.46 wind 3.0 14400 < th dose dependent sin 8 NA
784 86.48 wind 1.0 14400 < th dose independent rect. 4 9
835 86.54 precipitation 0.1 720 < th dose independent rect. 23 6
838 86.54 precipitation 0.1 720 < th dose independent rect. 24 20
840 86.54 precipitation 0.1 720 < th dose dependent rect. 23 6
847 86.54 precipitation 0.1 720 < th dose dependent rect. 24 20
848 86.55 atmosphere 1015.0 720 < th dose independent rect. 20 4
851 86.55 radiation 20.0 30 > th dose independent rect. 9 5
852 86.55 wind 1.0 14400 > th dose independent rect. 4 9
863 86.56 humidity 50.0 10 > th dose dependent rect. 6 20
895 86.59 radiation 10.0 10 > th dose dependent rect. 13 23
896 86.60 precipitation 0.1 720 < th dose independent rect. 21 2
900 86.60 precipitation 0.1 720 < th dose dependent rect. 21 2
915 86.61 humidity 70.0 1440 > th dose independent rect. 10 2
927 86.62 radiation 20.0 10 > th dose independent rect. 15 23
930 86.62 humidity 50.0 14400 > th dose dependent rect. 3 3
954 86.65 humidity 70.0 720 > th dose independent rect. 21 11