Os04g0439100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : T-complex 11 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0439100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : T-complex 11 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 101.81 | 0.474 | 12.5 | -0.239 | 1.4 | -1.09 | 0.0669 | 1.3 | -0.0874 | 5.28 | 24.3 | 1455 | -- | -- |
| 103.07 | 0.473 | 12.4 | 0.231 | 1.41 | -0.945 | -0.0574 | -- | 0.0416 | 5.26 | 23.2 | 1367 | -- | -- |
| 100.97 | 0.468 | 12.5 | -0.228 | 1.4 | -1 | -- | 1.19 | -0.0951 | 5.36 | 23.87 | 1354 | -- | -- |
| 102.96 | 0.473 | 12.4 | 0.232 | 1.4 | -0.95 | -- | -- | 0.0566 | 5.38 | 23.12 | 1316 | -- | -- |
| 199.2 | 0.657 | 12.5 | -0.148 | -- | -1.23 | -- | 0.856 | -0.0291 | -- | 23.9 | 2758 | -- | -- |
| 142.84 | 0.56 | 12.3 | 0.601 | 1.46 | -- | 0.0402 | -- | 0.453 | 5.2 | -- | -- | -- | -- |
| 142.84 | 0.56 | 12.3 | 0.601 | 1.46 | -- | -- | -- | 0.453 | 5.2 | -- | -- | -- | -- |
| 200.63 | 0.66 | 12.4 | 0.0918 | -- | -1.31 | -- | -- | -0.00265 | -- | 24.06 | 2767 | -- | -- |
| 104.27 | 0.476 | 12.4 | -- | 1.41 | -1 | -- | -- | 0.0115 | 5.34 | 23.16 | 1360 | -- | -- |
| 254.6 | 0.746 | 12.3 | 0.653 | -- | -- | -- | -- | 0.49 | -- | -- | -- | -- | -- |
| 152.37 | 0.577 | 12.3 | -- | 1.47 | -- | -- | -- | 0.386 | 5.18 | -- | -- | -- | -- |
| 200.77 | 0.66 | 12.4 | -- | -- | -1.28 | -- | -- | 0.0233 | -- | 24.05 | 2767 | -- | -- |
| 265.83 | 0.761 | 12.3 | -- | -- | -- | -- | -- | 0.418 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.90 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 4 | 95.47 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 15 |
| 6 | 95.55 | temperature | 30 | 720 | < th | dose dependent | sin | 9 | NA |
| 19 | 96.22 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 16 |
| 38 | 96.99 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 84 | 97.84 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 19 |
| 188 | 99.12 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 8 |
| 201 | 99.26 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 4 |
| 344 | 100.53 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 351 | 100.58 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 2 |
| 391 | 100.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 392 | 100.93 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 14 |
| 469 | 101.37 | temperature | 20 | 1440 | > th | dose dependent | sin | 14 | NA |
| 616 | 102.15 | temperature | 20 | 30 | > th | dose dependent | rect. | 4 | 18 |
| 731 | 102.67 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 739 | 102.71 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 827 | 103.14 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 861 | 103.25 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 20 |
| 885 | 103.34 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 951 | 103.57 | temperature | 25 | 1440 | < th | dose independent | rect. | 5 | 18 |
| 990 | 103.69 | temperature | 25 | 1440 | < th | dose independent | rect. | 13 | 10 |