BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0439100 Os04g0439100|AK120173
(976 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G22930.1 | chr1:8117521-8121854 FORWARD LENGTH=1132 635 0.0
AT4G09150.2 | chr4:5828753-5833475 FORWARD LENGTH=1099 554 e-158
>AT1G22930.1 | chr1:8117521-8121854 FORWARD LENGTH=1132
Length = 1131
Score = 635 bits (1639), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/1012 (37%), Positives = 570/1012 (56%), Gaps = 71/1012 (7%)
Query: 1 QAEANRMRLLHAHMQKRAAMKERTARSLVRKQTSERKYTERVKSLILQXXXXXXXXXXXX 60
+AEANRM++L A QKRA KERT++S++R+ E KY ERV++ I Q
Sbjct: 149 KAEANRMKILKASHQKRACAKERTSQSMMRRMARESKYKERVRASINQKRVAAEKKRLGL 208
Query: 61 XXXXXXXXQARILHIQRAAKTVCXXXXXXXXXXXXXXXXXXXXAKRQRAEYLKQRVSPRS 120
+AR+ ++ A +V AKR R+E+L+QR R
Sbjct: 209 LEAEKKKARARVQQVRHVANSVSNQREIERSKMRDKLEDKLQRAKRYRSEFLRQRRRQRD 268
Query: 121 SA--HADYIKH-AEFLSTKLARCWKRFLKSNKTTYALVQAYDALGINEMSVKSMPFENLA 177
S + D ++ A+ LS KL+RCW+ F++ +TT L +AYD L INE S+PFE LA
Sbjct: 269 SISLYCDMMQEDADLLSRKLSRCWRCFVRQKRTTLDLAKAYDGLKINE----SLPFEQLA 324
Query: 178 MLMESPTTLQTTKAVLDRFEKRL-------LLSQPTGSSSAENIDHLLKRLGSPKRKAPA 230
ML+ES TL+T K++LDR E RL +SQP S +NIDHLLKR+ +P+RKA
Sbjct: 325 MLLESLNTLKTVKSLLDRLEIRLEASKNVTTVSQP---SILDNIDHLLKRVATPRRKATP 381
Query: 231 S--RSR----VAAKKPAKGSETSKLSRYSLRVVLCSYMILAHPGAVLSGQGEKENLLMES 284
S RSR V++ + G+ + K+SRY +RVVL ++MIL HP AV +GQG++E L +
Sbjct: 382 STLRSRKGKKVSSVRNVAGT-SVKMSRYPVRVVLSAFMILGHPDAVFNGQGDQEAALNNA 440
Query: 285 AENFVKEFELLVKTVLDRP----GGASMQSTDAASQKKFRTQLAAFDKAWCAYLYHFVVW 340
A+ FV+E +LL+ + + P GG S T R+QL FDKAWC++L FV+W
Sbjct: 441 AKGFVRELKLLINVIQEGPVQVSGGESKHRT-------LRSQLDLFDKAWCSFLNSFVIW 493
Query: 341 KLKDAKSLEQDLVRAACKLELSMMQTCKLSSDGQSHDLSHDMKAIQKQVTDDQKLLREKI 400
K+KDA+ LE DLVRAAC+LELSM+Q CKL+ +G L+HD KAIQ QVT DQ+LL EK+
Sbjct: 494 KVKDARLLEDDLVRAACQLELSMIQKCKLTPEGVDTMLTHDKKAIQMQVTQDQELLTEKV 553
Query: 401 QHLSGDAGIERMNSALSDTRSKFFEAKENGNPLATSVANVSTP-----LSINSSGQVPNP 455
+HLSG AG+ERM SAL +TR+K+F+AKE+G+P+A +A+ +P + S
Sbjct: 554 RHLSGVAGVERMESALLETRTKYFQAKEDGSPMANQLAHFFSPSPASSPVQSVSSSSSRS 613
Query: 456 TSKPTVEGSSFTAQSL------PGAAXXXXXXXPMKPPTD-NEQMVNEMLHEDDVSFARN 508
VEGS+ +SL P + + ++ NE MVNE LH+ +++F
Sbjct: 614 KDSIGVEGSNRVNRSLLKDDTPPSSGPSRVSNGTVDEVSNQNELMVNEFLHDGNLNFPGG 673
Query: 509 SDNVSSAEKDFQAKVKATMEKAFWDLVTDSMRGDKPDYSQLINLVKEVRNSLHELASNXX 568
S V E + + ++K TME+AFWD V +SM+ +KPDYS + NL+KEV + L ++ +
Sbjct: 674 S-TVKDEEDNLKRRIKETMERAFWDNVMESMKLEKPDYSCISNLMKEVSDELCQMVPDSW 732
Query: 569 XXXXXXXXXXXXXSQVLQSGSQDTRYLGQILQYSLDMVRKLSAPAKEDDMKRSHEKLLNE 628
SQ+L SG+ D YLG++L+++L +RKLSAPA + + + +H LL E
Sbjct: 733 KVEITETIDLDILSQLLNSGTLDIDYLGKMLEFALATLRKLSAPANDRENESTHRDLLKE 792
Query: 629 LAASSEVNDNGISSFVIAVIKGLRFTLEEIKQLQTEVSKARIQLMQPIIKGSAGVEYLQK 688
L E D + +A++KG+RF LE+I++L+ E+ RI +M+P ++G AG +YL K
Sbjct: 793 LHRLCEAEDESGNFRAVAIVKGIRFILEQIQELKREIGIGRIAIMKPFLQGPAGFDYLTK 852
Query: 689 AFTDRYGPPANASVSLPITKQWVSATKSIVEQEWSSHLESLQALPADHAQHVVPVLRXXX 748
AF RYGPP A SLP+T++W+S S ++EW H +L AL + L+
Sbjct: 853 AFEKRYGPPTQAYESLPVTRRWISTLLS-SKEEWEEHNNTLSALNVVERSSMGISLKTGG 911
Query: 749 X----XXXXXXXXXXXXXXXXXECKGEKIDKLTRVGLLQLISNVEGLNMQSTPETFQINL 804
ECKGE++D R+GLL+L++ V GL + PETFQ+NL
Sbjct: 912 SFLSPVNTTSKSTVMDTAGQLSECKGERVDLAVRLGLLKLVNQVAGLTPEVLPETFQLNL 971
Query: 805 LRLRAVQDQFQKVIVIATSMLVLHQVLMLKIAPPELQNTISELYDALVKLLDNNADASTK 864
R+R +Q + Q +IV+ TS+L+ Q+L + ++ + L++LLD A
Sbjct: 972 FRVRDIQAEIQNIIVVTTSLLIWRQML------AKSESETESMAKKLLELLDGKEGAGLT 1025
Query: 865 EIVEAMTRSLASVGSLPEEQIQDTTELATKMLLKSLQAGDIVFGKVSRAVYFAFRXX-XX 923
EI+E ++ EE + ++ +L KSL G+ V+ +V+ +Y A R
Sbjct: 1026 EIIET---------TMSEED-GEKKKMMRGLLGKSLGEGNTVYERVTSCIYKAARGALLA 1075
Query: 924 XXXXXXXXXXEAPLRRL-GAAKLADRVVKAGEVLIKMAVISEKVHGQWYKAL 974
E ++++ G L +RV++ L +A +S +VHG W L
Sbjct: 1076 GNGENGKRMVETEMKKVGGGGGLKERVLETARALGVVACVSVRVHGPWLTQL 1127
>AT4G09150.2 | chr4:5828753-5833475 FORWARD LENGTH=1099
Length = 1098
Score = 554 bits (1428), Expect = e-158, Method: Compositional matrix adjust.
Identities = 349/992 (35%), Positives = 545/992 (54%), Gaps = 64/992 (6%)
Query: 1 QAEANRMRLLHAHMQKRAAMKERTARSLVRKQTSERKYTERVKSLILQXXXXXXXXXXXX 60
+AE NRM L A Q+RAA ++R A+SL++K E +Y E V++ I Q
Sbjct: 148 KAEKNRMLLFKAMAQRRAAKRQRAAQSLMKKAIQETRYKESVRAAIYQKRAAAESKRMGI 207
Query: 61 XXXXXXXXQARILHIQRAAKTVCXXXXXXXXXXXXXXXXXXXXAKRQRAEYLKQR--VSP 118
AR+ + AA +V AK+ +A+Y+++R +
Sbjct: 208 LEAERRRANARLTRVFGAASSVRSQKEAERRKMKDRLEERLQRAKKLKAQYMRRRRGMDS 267
Query: 119 RSSAHADYIKHAEF-LSTKLARCWKRFLKSNKTTYALVQAYDALGINEMSVKSMPFENLA 177
SS+ ++ ++ + L L RCW+RF K K+T+ L +AY LGINE S++S+PFE A
Sbjct: 268 CSSSRSETMRKNQVHLVRMLVRCWRRFAKYKKSTFVLARAYHELGINEKSIESVPFEQFA 327
Query: 178 MLMESPTTLQTTKAVLDRFEKRLLLSQPTGSSSAENIDHLLKRLGSPKR--KAPASRSRV 235
+ M S + +QT KA+LDR E RL LS+ +S+ ENI+HLLK + P R K+P+ S+
Sbjct: 328 IQMNSVSVIQTVKALLDRLEIRLTLSK---ASNVENINHLLKHIFPPVRRGKSPSPMSKG 384
Query: 236 AAKKPAKG---SETSKLSRYSLRVVLCSYMILAHPGAVLSGQGEKENLLMESAENFVKEF 292
P + K++RY R+ LC+YMI HPGA+ G+GE E L+ESA ++EF
Sbjct: 385 EQNSPNSKMGYQKLKKIARYPARIFLCAYMIKQHPGAIFRGRGEHEIALVESATCLIREF 444
Query: 293 ELLVKTVLDRPGGASMQSTDAASQ--KKFRTQLAAFDKAWCAYLYHFVVWKLKDAKSLEQ 350
ELLVK +L+ P + +Q KKFR+QL AFDKAWC+YL FVVWK+ DAK LE+
Sbjct: 445 ELLVKVILEGPESTLPGNVSFVAQRPKKFRSQLEAFDKAWCSYLEGFVVWKINDAKLLEK 504
Query: 351 DLVRAACKLELSMMQTCKLSSDGQSHDLSHDMKAIQKQVTDDQKLLREKIQHLSGDAGIE 410
DL R E + + K +S + D + K ++ ++ L E D
Sbjct: 505 DLARTQ---ESELSEVSKHTSSPKIIDSGLNQKTVKASSPTNRALFSET------DGA-- 553
Query: 411 RMNSALSDTRSKFFEAKENGNPLATSVANVSTPLSINSSGQVPNPTSKPTVEGSSFTAQS 470
R + A +D+ + G+ + N + +I S P V +SF A
Sbjct: 554 RESKAPADSHLPSSSSPSPGSSNLSPSLNSAGSEAI----------STPNVVANSFDAAL 603
Query: 471 LPGAAXXXXXXXPMKPPTDNEQMVNEMLHEDDVSFARNSDNVSSAEKDFQAKVKATMEKA 530
++NE +VNE++H++ SFA + D + + Q +VK TMEKA
Sbjct: 604 ----------------ASENEVIVNEIVHDNSSSFADSLDPNTGDTSNLQVRVKETMEKA 647
Query: 531 FWDLVTDSMRGDKPDYSQLINLVKEVRNSLHELASNXXXXXXXXXXXXXXXSQVLQSGSQ 590
FWD V +SM+ +PD+S +I L+KEVR+ L E++ SQ+L SG+
Sbjct: 648 FWDGVMESMKQSQPDFSWVIKLMKEVRDELCEISPKDWRQEIVQTIDTDVLSQLLASGNV 707
Query: 591 DTRYLGQILQYSLDMVRKLSAPAKEDDMKRSHEKLLNELAASSEVNDNGISSFVIAVIKG 650
D YLG IL++SL ++ KLSAPA E++++ +H KL+ EL + + SS+ + ++KG
Sbjct: 708 DMGYLGNILEFSLGILLKLSAPANEEEIRVTHHKLMTELGEIVPTDGHSNSSYAVLMVKG 767
Query: 651 LRFTLEEIKQLQTEVSKARIQLMQPIIKGSAGVEYLQKAFTDRYGPPANASVSLPITKQW 710
LRF L++I+ L+ E+SK+R++L++P++KG AG+EYL+K+F+ R+G P AS SLP+TK+W
Sbjct: 768 LRFVLQQIQILKKEISKSRLKLLEPLLKGPAGLEYLKKSFSSRHGSPDQASSSLPLTKRW 827
Query: 711 VSATKSIVEQEWSSHLESLQALPADHA-QHVVP--VLRXXXXXXXXXXXXXXXX---XXX 764
+ + + E+EW H ++L A+ +H+ +P +R
Sbjct: 828 LLSVRGEAEREWKEHKDALSAVINNHSGSSGLPSTTMRTGGNVSSVSKVNTPSSPFPGIE 887
Query: 765 XXECKGEKIDKLTRVGLLQLISNVEGLNMQSTPETFQINLLRLRAVQDQFQKVIVIATSM 824
ECKGE +D L R+GLL+++S + GL +++ PETFQ+NL RLR VQ Q QK+ +++ S+
Sbjct: 888 LSECKGETVDLLVRIGLLKMVSEIGGLTLETVPETFQLNLSRLRDVQSQIQKITLVSISV 947
Query: 825 LVLHQVLMLKIAPP-ELQNTISELYDALVKLLDNNADASTKEIVEAMTRSLASVGSLPEE 883
L+L Q L+ + + +++ + L ++LD DA EI+E ++ L S + ++
Sbjct: 948 LILQQTLVSENSSSIDMEAITRTCINRLYEMLDAKPDAGLSEIMETLSELLDSNDAETKK 1007
Query: 884 QIQDTTELATKMLLKSLQAGDIVFGKVSRAVYFAFRXXX-XXXXXXXXXXXEAPLRRLGA 942
Q+ ML+KSLQAGD VF VS+ +Y A R E LR++GA
Sbjct: 1008 QV------IANMLVKSLQAGDAVFTHVSQTIYLAIRAAVLAGNNTKRKQLVETMLRKIGA 1061
Query: 943 AKLADRVVKAGEVLIKMAVISEKVHGQWYKAL 974
A L+D+V++ ++L+ +A +S VHG WY+ L
Sbjct: 1062 ASLSDKVIEVSDILVLVATVSRSVHGLWYEEL 1093
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.127 0.347
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 16,515,268
Number of extensions: 596554
Number of successful extensions: 2110
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 2093
Number of HSP's successfully gapped: 4
Length of query: 976
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 868
Effective length of database: 8,145,641
Effective search space: 7070416388
Effective search space used: 7070416388
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 117 (49.7 bits)