Os04g0393500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glutaredoxin-like, plant II family protein.
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Os04g0393500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glutaredoxin-like, plant II family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 214.23 | 0.688 | 5.63 | 0.294 | 0.736 | 1.43 | 0.542 | -0.374 | -0.474 | 9.17 | 22.2 | 1361 | -- | -- |
| 214.39 | 0.682 | 5.64 | 0.205 | 0.736 | 1.46 | 0.512 | -- | -0.501 | 9.21 | 22.1 | 1358 | -- | -- |
| 215.15 | 0.683 | 5.63 | 0.314 | 0.733 | 1.46 | -- | -0.312 | -0.48 | 9.27 | 22.1 | 1356 | -- | -- |
| 215.34 | 0.683 | 5.64 | 0.213 | 0.738 | 1.46 | -- | -- | -0.503 | 9.32 | 22.1 | 1370 | -- | -- |
| 229.78 | 0.706 | 5.67 | 0.235 | -- | 1.55 | -- | 0.0408 | -0.502 | -- | 21.82 | 862 | -- | -- |
| 292.62 | 0.802 | 5.75 | -0.334 | 0.771 | -- | 0.4 | -- | -0.987 | 9.67 | -- | -- | -- | -- |
| 293.2 | 0.802 | 5.75 | -0.318 | 0.768 | -- | -- | -- | -0.986 | 9.76 | -- | -- | -- | -- |
| 229.74 | 0.706 | 5.66 | 0.241 | -- | 1.56 | -- | -- | -0.501 | -- | 21.83 | 845 | -- | -- |
| 216.4 | 0.685 | 5.65 | -- | 0.731 | 1.41 | -- | -- | -0.537 | 9.27 | 22.1 | 1356 | -- | -- |
| 328.35 | 0.847 | 5.77 | -0.326 | -- | -- | -- | -- | -0.985 | -- | -- | -- | -- | -- |
| 295.87 | 0.805 | 5.74 | -- | 0.769 | -- | -- | -- | -0.951 | 9.8 | -- | -- | -- | -- |
| 230.79 | 0.708 | 5.68 | -- | -- | 1.49 | -- | -- | -0.548 | -- | 22 | 832 | -- | -- |
| 331.14 | 0.849 | 5.77 | -- | -- | -- | -- | -- | -0.949 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 218.13 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 6 | 218.37 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 8 | 218.47 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 21 | 219.18 | temperature | 25 | 270 | < th | dose dependent | rect. | 24 | 22 |
| 29 | 219.34 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 30 | 219.36 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 34 | 219.43 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 21 |
| 45 | 219.60 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 50 | 219.67 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 96 | 220.27 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 104 | 220.34 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 112 | 220.47 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 125 | 220.61 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 5 |
| 126 | 220.62 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 140 | 220.72 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 144 | 220.75 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 145 | 220.76 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 201 | 221.19 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 283 | 221.82 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 337 | 222.17 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 414 | 222.74 | temperature | 15 | 270 | > th | dose dependent | sin | 8 | NA |
| 452 | 222.98 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 482 | 223.18 | temperature | 15 | 720 | > th | dose dependent | sin | 10 | NA |
| 738 | 224.92 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 868 | 225.66 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 911 | 225.93 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 921 | 225.99 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 948 | 226.15 | temperature | 15 | 270 | > th | dose dependent | rect. | 8 | 23 |
| 952 | 226.18 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 23 |
| 983 | 226.42 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |