Os04g0391900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Amidohydrolase 2 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0391900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Amidohydrolase 2 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.46 | 0.416 | 10.3 | -1.46 | 2.84 | -1.17 | 1.2 | -0.975 | -0.787 | 8.18 | 55.17 | 1073 | -- | -- |
| 79.62 | 0.416 | 10.3 | -1.56 | 2.76 | -1.17 | 0.947 | -- | -0.797 | 8.17 | 53.17 | 1132 | -- | -- |
| 82.04 | 0.422 | 10.3 | -1.46 | 2.74 | -1.11 | -- | -0.526 | -0.782 | 8.15 | 54.78 | 1155 | -- | -- |
| 82.35 | 0.423 | 10.3 | -1.52 | 2.75 | -1.14 | -- | -- | -0.799 | 8.16 | 52.19 | 1145 | -- | -- |
| 449.18 | 0.987 | 10.4 | -1.4 | -- | -1.16 | -- | -0.541 | -0.801 | -- | 61.49 | 1409 | -- | -- |
| 105.35 | 0.481 | 10.3 | -1.49 | 2.62 | -- | 0.842 | -- | -0.754 | 7.78 | -- | -- | -- | -- |
| 107.39 | 0.485 | 10.3 | -1.46 | 2.62 | -- | -- | -- | -0.755 | 7.78 | -- | -- | -- | -- |
| 449.59 | 0.988 | 10.4 | -1.46 | -- | -1.2 | -- | -- | -0.813 | -- | 61.3 | 1405 | -- | -- |
| 139.82 | 0.551 | 10.3 | -- | 2.63 | -1.37 | -- | -- | -0.727 | 8.02 | 78 | 1263 | -- | -- |
| 479.29 | 1.02 | 10.4 | -1.43 | -- | -- | -- | -- | -0.718 | -- | -- | -- | -- | -- |
| 163.93 | 0.599 | 10.3 | -- | 2.61 | -- | -- | -- | -0.592 | 7.82 | -- | -- | -- | -- |
| 502.37 | 1.04 | 10.4 | -- | -- | -1.53 | -- | -- | -0.734 | -- | 76.07 | 1383 | -- | -- |
| 533.42 | 1.08 | 10.3 | -- | -- | -- | -- | -- | -0.559 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.50 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 9 | 73.45 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 8 |
| 27 | 74.69 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 31 | 74.91 | humidity | 80.0 | 1440 | < th | dose independent | sin | 2 | NA |
| 43 | 75.33 | humidity | 80.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 49 | 75.60 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 58 | 75.86 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 59 | 75.86 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 76 | 76.33 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 10 | 3 |
| 196 | 78.43 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 198 | 78.44 | humidity | 60.0 | 1440 | > th | dose dependent | sin | 2 | NA |
| 265 | 78.98 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 14 | 3 |
| 268 | 79.00 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 6 | 11 |
| 284 | 79.07 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 8 | 9 |
| 298 | 79.15 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 302 | 79.17 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 307 | 79.19 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 314 | 79.23 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 12 |
| 323 | 79.27 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 12 | 5 |
| 328 | 79.30 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 3 | NA |
| 343 | 79.35 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 349 | 79.38 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 370 | 79.46 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 4 |
| 372 | 79.46 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 4 |
| 410 | 79.62 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 417 | 79.63 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 12 | 5 |
| 422 | 79.64 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 425 | 79.64 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 495 | 79.86 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 9 | 5 |
| 508 | 79.90 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 9 | 8 |
| 510 | 79.91 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 6 | 11 |
| 526 | 79.95 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 9 | 8 |
| 528 | 79.95 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 9 | 8 |
| 554 | 80.03 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 6 | 11 |
| 556 | 80.03 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 6 | 11 |
| 600 | 80.09 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 20 | 23 |
| 748 | 80.29 | humidity | 70.0 | 1440 | > th | dose independent | no | NA | NA |
| 779 | 80.31 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 13 |
| 786 | 80.31 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 13 |
| 807 | 80.34 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 826 | 80.37 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 13 |
| 858 | 80.41 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 865 | 80.43 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 13 |
| 876 | 80.45 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 13 |
| 878 | 80.45 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 13 |
| 889 | 80.48 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 893 | 80.48 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 10 |
| 1000 | 80.68 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 23 |