Os04g0341100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Aldo/keto reductase family protein.
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Os04g0341100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Aldo/keto reductase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 118.68 | 0.512 | 13.5 | -0.48 | 1.55 | -1.67 | 0.285 | 1.54 | -1.14 | 20.3 | 28.9 | 575 | -- | -- |
| 119.62 | 0.509 | 13.5 | -0.31 | 1.53 | -1.56 | 0.144 | -- | -1.12 | 20.3 | 28.7 | 574 | -- | -- |
| 118.87 | 0.508 | 13.5 | -0.461 | 1.55 | -1.67 | -- | 1.31 | -1.14 | 20.3 | 28.9 | 573 | -- | -- |
| 119.45 | 0.509 | 13.5 | -0.291 | 1.54 | -1.55 | -- | -- | -1.11 | 20.3 | 28.65 | 563 | -- | -- |
| 206.84 | 0.67 | 13.6 | -0.983 | -- | -2.71 | -- | 2.67 | -1.39 | -- | 28.3 | 629 | -- | -- |
| 169.2 | 0.61 | 13.5 | 0.00975 | 2.29 | -- | 0.807 | -- | -0.958 | 19.6 | -- | -- | -- | -- |
| 171.02 | 0.612 | 13.5 | -0.0102 | 2.29 | -- | -- | -- | -0.957 | 19.6 | -- | -- | -- | -- |
| 209.12 | 0.674 | 13.5 | -0.644 | -- | -2.39 | -- | -- | -1.34 | -- | 28.2 | 578 | -- | -- |
| 121.58 | 0.514 | 13.5 | -- | 1.57 | -1.48 | -- | -- | -1.07 | 20.3 | 28.68 | 563 | -- | -- |
| 452.33 | 0.994 | 13.4 | -0.0421 | -- | -- | -- | -- | -0.991 | -- | -- | -- | -- | -- |
| 171.02 | 0.612 | 13.5 | -- | 2.29 | -- | -- | -- | -0.956 | 19.6 | -- | -- | -- | -- |
| 215 | 0.683 | 13.5 | -- | -- | -2.4 | -- | -- | -1.22 | -- | 28.18 | 579 | -- | -- |
| 452.37 | 0.993 | 13.4 | -- | -- | -- | -- | -- | -0.987 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 117.69 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 13 | 7 |
| 2 | 118.29 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 15 |
| 30 | 121.84 | radiation | 1.0 | 270 | < th | dose independent | rect. | 16 | 9 |
| 33 | 122.06 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 16 | 9 |
| 36 | 122.21 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 1 | 22 |
| 40 | 122.38 | humidity | 70.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 42 | 122.46 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 16 | 21 |
| 48 | 123.00 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 16 |
| 52 | 123.03 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 19 |
| 57 | 123.25 | humidity | 70.0 | 270 | > th | dose independent | rect. | 15 | 10 |
| 69 | 123.91 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 71 | 123.96 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 20 |
| 75 | 124.20 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 10 | 14 |
| 79 | 124.26 | temperature | 30.0 | 270 | < th | dose independent | rect. | 5 | 20 |
| 85 | 124.46 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 96 | 124.60 | temperature | 25.0 | 270 | > th | dose independent | rect. | 13 | 7 |
| 111 | 124.76 | humidity | 90.0 | 270 | < th | dose independent | rect. | 13 | 7 |
| 113 | 124.76 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 8 | 14 |
| 114 | 124.78 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 1 | 21 |
| 121 | 124.88 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 8 |
| 174 | 125.32 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 8 | 21 |
| 203 | 125.49 | temperature | 25.0 | 720 | > th | dose dependent | no | NA | NA |
| 208 | 125.50 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 253 | 125.79 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 1 | 22 |
| 254 | 125.79 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 257 | 125.81 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 8 |
| 259 | 125.87 | temperature | 25.0 | 270 | > th | dose dependent | sin | 16 | NA |
| 266 | 125.94 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 16 | 7 |
| 268 | 125.97 | temperature | 25.0 | 720 | > th | dose dependent | sin | 21 | NA |
| 287 | 126.18 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 14 | 9 |
| 335 | 126.59 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 19 | 6 |
| 344 | 126.69 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 16 | 15 |
| 345 | 126.70 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 18 |
| 346 | 126.70 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 18 |
| 349 | 126.77 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 19 | 6 |
| 356 | 126.84 | humidity | 70.0 | 270 | > th | dose independent | rect. | 11 | 13 |
| 360 | 126.88 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 9 | 15 |
| 388 | 127.20 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 390 | 127.21 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 17 |
| 391 | 127.21 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 20 |
| 393 | 127.21 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 20 |
| 397 | 127.24 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 422 | 127.42 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 423 | 127.42 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 9 |
| 424 | 127.42 | temperature | 10.0 | 270 | > th | dose dependent | sin | 18 | NA |
| 427 | 127.46 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 8 |
| 430 | 127.48 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 438 | 127.56 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 473 | 127.85 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 474 | 127.86 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 499 | 127.94 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 7 |
| 502 | 127.96 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 22 |
| 503 | 127.96 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 3 | 9 |
| 504 | 127.96 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 522 | 128.04 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 4 |
| 527 | 128.08 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 7 |
| 530 | 128.10 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 3 | 7 |
| 533 | 128.13 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 15 |
| 535 | 128.13 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 537 | 128.13 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 15 |
| 542 | 128.14 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 10 |
| 565 | 128.24 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 568 | 128.27 | wind | 9.0 | 90 | < th | dose independent | rect. | 1 | 22 |
| 599 | 128.38 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 642 | 128.56 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 646 | 128.57 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 669 | 128.63 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 8 | 3 |
| 683 | 128.68 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 707 | 128.80 | radiation | 1.0 | 270 | < th | dose independent | sin | 15 | NA |
| 715 | 128.83 | radiation | 1.0 | 270 | > th | dose independent | sin | 15 | NA |
| 756 | 128.99 | radiation | 1.0 | 270 | < th | dose dependent | sin | 16 | NA |
| 788 | 129.13 | wind | 3.0 | 270 | > th | dose independent | rect. | 12 | 7 |
| 817 | 129.23 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 1 | 22 |
| 832 | 129.27 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 838 | 129.28 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 840 | 129.28 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 841 | 129.28 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 842 | 129.28 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 6 |
| 847 | 129.28 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 848 | 129.28 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 857 | 129.29 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 872 | 129.35 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 876 | 129.36 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 887 | 129.39 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 6 |
| 901 | 129.45 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 912 | 129.50 | wind | 1.0 | 270 | > th | dose independent | rect. | 11 | 9 |
| 920 | 129.52 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 922 | 129.52 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 956 | 129.63 | wind | 7.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 970 | 129.67 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 11 | 5 |