Os04g0320100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Coenzyme F420 hydrogenase/dehydrogenase beta subunit, N-terminal domain containing protein.
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Os04g0320100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Coenzyme F420 hydrogenase/dehydrogenase beta subunit, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.39 | 0.272 | 14.2 | -1.39 | 0.691 | 0.148 | 0.373 | -1.89 | 0.28 | 2.54 | 0.45 | 4154 | -- | -- |
| 38.52 | 0.289 | 14.2 | -1.23 | 0.696 | 0.273 | 0.0611 | -- | 0.285 | 2.33 | 0.05986 | 47520 | -- | -- |
| 33.68 | 0.27 | 14.2 | -1.38 | 0.689 | 0.149 | -- | -1.97 | 0.279 | 2.46 | 0.3812 | 4060 | -- | -- |
| 36.44 | 0.281 | 14.2 | -1.15 | 0.695 | 0.381 | -- | -- | 0.29 | 2.2 | 0.08138 | 17230 | -- | -- |
| 50.98 | 0.334 | 14.2 | -0.908 | -- | -0.394 | -- | 0.205 | 0.423 | -- | 0.3812 | 4060 | -- | -- |
| 39.4 | 0.294 | 14.2 | -0.95 | 0.701 | -- | 0.0843 | -- | 0.407 | 2.36 | -- | -- | -- | -- |
| 39.43 | 0.294 | 14.2 | -0.953 | 0.701 | -- | -- | -- | 0.406 | 2.34 | -- | -- | -- | -- |
| 50.99 | 0.334 | 14.2 | -0.937 | -- | -0.397 | -- | -- | 0.453 | -- | 3.507 | 6221 | -- | -- |
| 49.03 | 0.326 | 14.1 | -- | 0.783 | 0.547 | -- | -- | 0.637 | 2.07 | 58.68 | 47520 | -- | -- |
| 68.52 | 0.387 | 14.2 | -0.923 | -- | -- | -- | -- | 0.423 | -- | -- | -- | -- | -- |
| 63.34 | 0.372 | 14.1 | -- | 0.682 | -- | -- | -- | 0.512 | 2.32 | -- | -- | -- | -- |
| 74.07 | 0.402 | 14.1 | -- | -- | -0.389 | -- | -- | 0.551 | -- | 3.016 | 6196 | -- | -- |
| 90.99 | 0.445 | 14.1 | -- | -- | -- | -- | -- | 0.526 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.74 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 10 |
| 3 | 33.05 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 21 |
| 10 | 33.21 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 13 | 33.23 | temperature | 10.0 | 270 | > th | dose dependent | sin | 11 | NA |
| 23 | 33.36 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 14 | 17 |
| 28 | 33.39 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 14 | 14 |
| 30 | 33.40 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 41 | 33.46 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 48 | 33.49 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 16 | 5 |
| 53 | 33.50 | temperature | 10.0 | 720 | > th | dose dependent | sin | 16 | NA |
| 93 | 33.65 | temperature | 30.0 | 270 | < th | dose dependent | sin | 10 | NA |
| 94 | 33.65 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 117 | 33.71 | temperature | 20.0 | 90 | > th | dose independent | rect. | 17 | 12 |
| 122 | 33.73 | temperature | 30.0 | 720 | < th | dose dependent | sin | 14 | NA |
| 149 | 33.79 | temperature | 20.0 | 270 | > th | dose independent | rect. | 16 | 10 |
| 168 | 33.83 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 184 | 33.85 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 16 | 11 |
| 189 | 33.86 | temperature | 20.0 | 720 | > th | dose independent | rect. | 17 | 2 |
| 194 | 33.86 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 22 |
| 213 | 33.89 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 20 |
| 220 | 33.90 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 18 | 23 |
| 264 | 33.97 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 273 | 33.98 | temperature | 30.0 | 720 | < th | dose dependent | no | NA | NA |
| 283 | 33.99 | wind | 5.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 296 | 34.00 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 16 | 9 |
| 309 | 34.01 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 9 |
| 389 | 34.09 | wind | 5.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 399 | 34.09 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 429 | 34.11 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 431 | 34.12 | temperature | 15.0 | 720 | > th | dose dependent | no | NA | NA |
| 439 | 34.12 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 461 | 34.15 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 495 | 34.16 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 535 | 34.20 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 11 | 9 |
| 559 | 34.22 | temperature | 20.0 | 720 | > th | dose independent | rect. | 16 | 5 |
| 562 | 34.22 | temperature | 20.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 598 | 34.24 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 18 | 11 |
| 633 | 34.26 | temperature | 25.0 | 720 | > th | dose independent | rect. | 7 | 14 |
| 650 | 34.27 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 679 | 34.29 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 680 | 34.29 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 10 | 5 |
| 681 | 34.29 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 10 | 8 |
| 685 | 34.29 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 23 | 4 |
| 722 | 34.31 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 727 | 34.31 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 22 | 10 |
| 752 | 34.32 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 753 | 34.32 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 794 | 34.33 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 822 | 34.33 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 823 | 34.34 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 842 | 34.35 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 870 | 34.36 | temperature | 20.0 | 90 | > th | dose independent | rect. | 7 | 22 |
| 874 | 34.36 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 19 | 7 |
| 912 | 34.38 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 913 | 34.38 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 914 | 34.38 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 915 | 34.38 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 921 | 34.38 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 922 | 34.38 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 990 | 34.41 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 995 | 34.41 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |