Os04g0281900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF588 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0281900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF588 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.05 | 0.319 | 12.2 | 0.0334 | 1.63 | 0.778 | -0.157 | -0.833 | 0.0458 | 8.83 | 25.67 | 1317 | -- | -- |
| 46.64 | 0.318 | 12.1 | 0.267 | 1.65 | 0.725 | -0.129 | -- | 0.121 | 8.81 | 25.6 | 1298 | -- | -- |
| 46.08 | 0.316 | 12.2 | 0.0386 | 1.63 | 0.786 | -- | -0.812 | 0.0478 | 8.84 | 25.61 | 1298 | -- | -- |
| 46.65 | 0.318 | 12.1 | 0.269 | 1.63 | 0.729 | -- | -- | 0.123 | 8.83 | 25.69 | 1298 | -- | -- |
| 194.19 | 0.649 | 12.2 | 0.0523 | -- | 0.714 | -- | -0.726 | 0.0699 | -- | 25.6 | 1412 | -- | -- |
| 60.81 | 0.366 | 12.1 | 0.493 | 1.62 | -- | -0.12 | -- | 0.368 | 8.57 | -- | -- | -- | -- |
| 60.86 | 0.365 | 12.1 | 0.489 | 1.62 | -- | -- | -- | 0.368 | 8.56 | -- | -- | -- | -- |
| 192.13 | 0.646 | 12.2 | 0.247 | -- | 0.716 | -- | -- | 0.114 | -- | 24.6 | 1437 | -- | -- |
| 48.44 | 0.324 | 12.1 | -- | 1.63 | 0.782 | -- | -- | 0.0766 | 8.81 | 25.7 | 1328 | -- | -- |
| 207.56 | 0.673 | 12.1 | 0.495 | -- | -- | -- | -- | 0.383 | -- | -- | -- | -- | -- |
| 67.17 | 0.383 | 12.1 | -- | 1.62 | -- | -- | -- | 0.313 | 8.54 | -- | -- | -- | -- |
| 193.61 | 0.648 | 12.2 | -- | -- | 0.764 | -- | -- | 0.0856 | -- | 24.6 | 1437 | -- | -- |
| 214.03 | 0.683 | 12.1 | -- | -- | -- | -- | -- | 0.328 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.15 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 6 |
| 2 | 45.65 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 4 | 45.78 | temperature | 25 | 720 | > th | dose independent | rect. | 20 | 2 |
| 5 | 45.85 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 18 |
| 7 | 45.99 | wind | 7 | 43200 | > th | dose independent | rect. | 12 | 3 |
| 8 | 46.02 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 3 |
| 9 | 46.05 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 21 | 46.19 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 18 |
| 30 | 46.32 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 4 |
| 39 | 46.40 | humidity | 90 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 41 | 46.42 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 7 |
| 47 | 46.46 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 4 |
| 52 | 46.49 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 6 |
| 95 | 46.66 | temperature | 25 | 1440 | > th | dose independent | rect. | 5 | 20 |
| 104 | 46.68 | temperature | 25 | 720 | > th | dose dependent | rect. | 19 | 13 |
| 107 | 46.69 | temperature | 25 | 1440 | < th | dose independent | rect. | 5 | 20 |
| 126 | 46.74 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 8 |
| 127 | 46.75 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 10 |
| 137 | 46.78 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 11 |
| 139 | 46.78 | humidity | 90 | 43200 | > th | dose dependent | sin | 13 | NA |
| 153 | 46.82 | radiation | 1 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 164 | 46.84 | radiation | 1 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 165 | 46.84 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 11 |
| 167 | 46.84 | humidity | 90 | 43200 | > th | dose dependent | rect. | 2 | 4 |
| 169 | 46.85 | temperature | 25 | 1440 | > th | dose independent | rect. | 8 | 17 |
| 175 | 46.86 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 180 | 46.87 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 206 | 46.89 | temperature | 25 | 1440 | < th | dose independent | rect. | 8 | 17 |
| 209 | 46.90 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 3 |
| 212 | 46.90 | temperature | 25 | 1440 | > th | dose independent | rect. | 14 | 11 |
| 217 | 46.91 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 7 |
| 218 | 46.91 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 9 |
| 239 | 46.93 | temperature | 20 | 720 | > th | dose dependent | sin | 14 | NA |
| 293 | 47.00 | humidity | 90 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 304 | 47.01 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 6 |
| 307 | 47.01 | temperature | 25 | 1440 | < th | dose independent | rect. | 14 | 11 |
| 314 | 47.02 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 14 |
| 323 | 47.03 | wind | 7 | 43200 | < th | dose independent | rect. | 11 | 11 |
| 337 | 47.04 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 14 |
| 362 | 47.08 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 4 |
| 413 | 47.12 | humidity | 90 | 43200 | > th | dose independent | sin | 12 | NA |
| 415 | 47.12 | humidity | 90 | 43200 | < th | dose independent | sin | 13 | NA |
| 451 | 47.16 | temperature | 25 | 1440 | > th | dose independent | sin | 17 | NA |
| 474 | 47.18 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 14 |
| 477 | 47.18 | temperature | 25 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 503 | 47.20 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 504 | 47.20 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 505 | 47.20 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 520 | 47.21 | temperature | 25 | 1440 | < th | dose independent | rect. | 8 | 23 |
| 530 | 47.22 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 531 | 47.22 | temperature | 25 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 532 | 47.22 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 23 |
| 534 | 47.22 | temperature | 25 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 542 | 47.23 | temperature | 25 | 1440 | > th | dose independent | no | NA | NA |
| 546 | 47.23 | temperature | 25 | 720 | > th | dose independent | rect. | 12 | 20 |
| 563 | 47.25 | temperature | 25 | 1440 | < th | dose independent | no | NA | NA |
| 573 | 47.25 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 23 |
| 608 | 47.28 | temperature | 25 | 1440 | < th | dose independent | sin | 17 | NA |
| 610 | 47.28 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 648 | 47.30 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 3 |
| 651 | 47.30 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 19 |
| 713 | 47.35 | radiation | 1 | 43200 | > th | dose independent | rect. | 8 | 5 |
| 714 | 47.35 | radiation | 1 | 43200 | < th | dose independent | rect. | 8 | 5 |
| 738 | 47.36 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 10 |
| 744 | 47.37 | humidity | 90 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 828 | 47.42 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 12 |
| 846 | 47.43 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 8 |
| 860 | 47.44 | radiation | 1 | 43200 | < th | dose dependent | rect. | 8 | 6 |
| 877 | 47.45 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 5 |
| 898 | 47.46 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 907 | 47.46 | humidity | 90 | 43200 | > th | dose dependent | no | NA | NA |
| 972 | 47.51 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 994 | 47.52 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 11 |
| 997 | 47.52 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 14 |