BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0281900 Os04g0281900|AK061149
(209 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G17200.1 | chr1:5878493-5879871 FORWARD LENGTH=205 192 1e-49
AT3G14380.1 | chr3:4803175-4803799 REVERSE LENGTH=179 136 8e-33
AT5G54980.1 | chr5:22315799-22316560 FORWARD LENGTH=195 86 1e-17
AT4G16442.1 | chr4:9272042-9272970 REVERSE LENGTH=183 61 4e-10
AT4G15630.1 | chr4:8917527-8918683 FORWARD LENGTH=191 59 2e-09
AT2G36100.1 | chr2:15159744-15160669 REVERSE LENGTH=207 58 3e-09
AT5G15290.1 | chr5:4967094-4967846 FORWARD LENGTH=188 55 3e-08
AT2G27370.1 | chr2:11708628-11709905 REVERSE LENGTH=222 55 3e-08
AT4G15620.1 | chr4:8913935-8915531 FORWARD LENGTH=191 54 6e-08
AT4G25830.1 | chr4:13133727-13134790 FORWARD LENGTH=176 53 1e-07
AT1G14160.1 | chr1:4840798-4841660 REVERSE LENGTH=210 49 1e-06
AT2G35760.1 | chr2:15032059-15033094 FORWARD LENGTH=202 49 1e-06
AT5G06200.1 | chr5:1877333-1878116 FORWARD LENGTH=203 49 1e-06
AT1G03700.1 | chr1:921038-921844 FORWARD LENGTH=165 48 4e-06
AT1G79780.1 | chr1:30015930-30016856 FORWARD LENGTH=188 47 7e-06
AT4G25040.1 | chr4:12868320-12869319 FORWARD LENGTH=171 47 7e-06
>AT1G17200.1 | chr1:5878493-5879871 FORWARD LENGTH=205
Length = 204
Score = 192 bits (488), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 92/173 (53%), Positives = 121/173 (69%), Gaps = 1/173 (0%)
Query: 36 VRPVETLLRAAPLGLCVAAMAIMLRNSVTNEYGTVSYSDLGGFKYLVYANGLCAAYSLAS 95
+R ET+LR AP+GLCVAA+ +ML++S TNE+G++SYS+L F+YLV+ANG+CA YSL S
Sbjct: 30 IRTAETMLRLAPVGLCVAALVVMLKDSETNEFGSISYSNLTAFRYLVHANGICAGYSLLS 89
Query: 96 AFYIAVPRPA-TLSRSWVVFLLDQVFTYLILAAGAASAELLYLAYNGDKEVTWSEACGVF 154
A A+PR + T+ R W F LDQ+ TYL+LAAGA SAE+LYLAYNGD +TWS+AC +
Sbjct: 90 AAIAAMPRSSSTMPRVWTFFCLDQLLTYLVLAAGAVSAEVLYLAYNGDSAITWSDACSSY 149
Query: 155 GGFCRQARTSVAITFASVACXXXXXXXXXXRLFSAYDPPQPSLGNKGVEIAAF 207
GGFC +A SV ITF V +LF+ +DPP K +E+A F
Sbjct: 150 GGFCHRATASVIITFFVVCFYIVLSLISSYKLFTRFDPPSIVDSAKNLEVAVF 202
>AT3G14380.1 | chr3:4803175-4803799 REVERSE LENGTH=179
Length = 178
Score = 136 bits (342), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 99/158 (62%), Gaps = 1/158 (0%)
Query: 37 RPVETLLRAAPLGLCVAAMAIMLRNSVTNEYGTVSYSDLGGFKYLVYANGLCAAYSLASA 96
+ E +LR A + L + + IM++NS++NE+G+VSYS++G F YLV ANG+CAAYSL SA
Sbjct: 21 KSAEAVLRVASMALSITGLVIMIKNSISNEFGSVSYSNIGAFMYLVSANGVCAAYSLLSA 80
Query: 97 FYIAV-PRPATLSRSWVVFLLDQVFTYLILAAGAASAELLYLAYNGDKEVTWSEACGVFG 155
I P P + + +FLLDQV TY++LAAGA SAE +YLAY G+ +TWS AC +G
Sbjct: 81 LAILALPCPISKVQVRTLFLLDQVVTYVVLAAGAVSAETVYLAYYGNIPITWSSACDSYG 140
Query: 156 GFCRQARTSVAITFASVACXXXXXXXXXXRLFSAYDPP 193
FC A SV TF RLF+ ++ P
Sbjct: 141 SFCHNALISVVFTFVVSLLYMLLSLISSYRLFTRFEAP 178
>AT5G54980.1 | chr5:22315799-22316560 FORWARD LENGTH=195
Length = 194
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 86/167 (51%), Gaps = 3/167 (1%)
Query: 36 VRPVETLLRAAPLGLCVAAMAIMLRNSVTN-EYGTVSYSDLGGFKYLVYANGLCAAYSLA 94
++ +++ LR + + L VA + + + N +N +YG + Y+ + G KY+V + + A Y+L
Sbjct: 29 LKIIDSCLRLSVVPLSVATIWLTVTNHESNPDYGNLEYNSIMGLKYMVGVSAISAIYALL 88
Query: 95 SAFYIAVPRPATLSRSWVVFLLDQVFTYLILAAGAASAELLYLAYNGDKEVTWSEACGVF 154
S V +S++W+ F+ DQV Y++ + A + E++YL GDK VTWSE C +
Sbjct: 89 STVSSWVT--CLVSKAWLFFIPDQVLAYVMTTSVAGATEIVYLLNKGDKIVTWSEMCSSY 146
Query: 155 GGFCRQARTSVAITFASVACXXXXXXXXXXRLFSAYDPPQPSLGNKG 201
+C + ++ + + R FS +DPP S N
Sbjct: 147 PHYCSKLTIALGLHVFVLFFFLFLSVISAYRAFSPFDPPCDSQTNND 193
>AT4G16442.1 | chr4:9272042-9272970 REVERSE LENGTH=183
Length = 182
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 9/135 (6%)
Query: 35 RVRPVETLLRAAPLGLCVAAMAIMLRNS----VTNEYGTVSYSDLGGFKYLVYANGLCAA 90
R+R E LLR + + A+ +++ ++ + T Y+D+ +LV ANG+ A
Sbjct: 7 RMRLTELLLRCSISVFALLALILVVTDTEVKLIFTIKKTAKYTDMKAVVFLVVANGIAAV 66
Query: 91 YSLASAFYIAV---PRPATLSR--SWVVFLLDQVFTYLILAAGAASAELLYLAYNGDKEV 145
YSL + V S+ +W F DQ YL +AA AA+AE +A G++++
Sbjct: 67 YSLLQSVRCVVGTMKGKVLFSKPLAWAFFSGDQAMAYLNVAAIAATAESGVIAREGEEDL 126
Query: 146 TWSEACGVFGGFCRQ 160
W C ++G FC Q
Sbjct: 127 QWMRVCTMYGKFCNQ 141
>AT4G15630.1 | chr4:8917527-8918683 FORWARD LENGTH=191
Length = 190
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 65 NEYGTVSYSDLGGFKYLVYANGLCAAYSLASAFYIAVPRPATLSRSWVVFLL--DQVFTY 122
N T S L F Y + AN + Y+ S + + + S+S ++ +L D +
Sbjct: 67 NVSTTAKASYLSAFVYNISANAIACGYTAISIVIVMISK-GKRSKSLLMAVLIGDLMMVA 125
Query: 123 LILAAGAASAELLYLAYNGDKEVTWSEACGVFGGFCRQARTSVAITF 169
L+ ++ A+ + + +G+K V W + CGVFG FC QA SVAIT
Sbjct: 126 LLFSSTGAAGAIGLMGRHGNKHVMWKKVCGVFGKFCNQAAVSVAITL 172
>AT2G36100.1 | chr2:15159744-15160669 REVERSE LENGTH=207
Length = 206
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 8/132 (6%)
Query: 42 LLRAAPLGLCVAAMAIMLRNSVTNEYGT------VSYSDLGGFKYLVYANGLCAAYSLAS 95
LLR A + + + A ++M T + T Y DL F+Y V A + A+Y + S
Sbjct: 51 LLRLAAIAVTIGAASVMYTAEETLPFFTQFLQFQAGYDDLPAFQYFVIAVAVVASYLVLS 110
Query: 96 AFY--IAVPRPATLSRSWVVFLLDQVFTYLILAAGAASAELLYLAYNGDKEVTWSEACGV 153
+ +++ RP ++ ++ + D + L +A AA+A + YLA+NG++ W C
Sbjct: 111 LPFSIVSIVRPHAVAPRLILLICDTLVVTLNTSAAAAAASITYLAHNGNQSTNWLPICQQ 170
Query: 154 FGGFCRQARTSV 165
FG FC+ T+V
Sbjct: 171 FGDFCQNVSTAV 182
>AT5G15290.1 | chr5:4967094-4967846 FORWARD LENGTH=188
Length = 187
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 10/159 (6%)
Query: 20 MQSSGDLQXXXXXXXRVRPVETLLRAAPLGLCVAAMAIMLRNSVTNEYGT------VSYS 73
M++S +Q R+ +E +LR + + +M T + T Y+
Sbjct: 9 METSKGIQKSGLMSRRIAILEFILRIVAFFNTIGSAILMGTTHETLPFFTQFIRFQAEYN 68
Query: 74 DLGGFKYLVYANGLCAAY---SLASAFYIAVPRPATLSRSWVVFLLDQVFTYLILAAGAA 130
DL + V AN + + Y SL AF V R +R ++ +LD L+ + ++
Sbjct: 69 DLPALTFFVVANAVVSGYLILSLTLAFVHIVKRKTQNTRILLI-ILDVAMLGLLTSGASS 127
Query: 131 SAELLYLAYNGDKEVTWSEACGVFGGFCRQARTSVAITF 169
+A ++YLA+NG+ + W C F FC + S+ +F
Sbjct: 128 AAAIVYLAHNGNNKTNWFAICQQFNSFCERISGSLIGSF 166
>AT2G27370.1 | chr2:11708628-11709905 REVERSE LENGTH=222
Length = 221
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Query: 71 SYSDLGGFKYLVYANGLCAAY-SLASAFYIA-VPRPATLSRSWVVFLLDQVFTYLILAAG 128
Y+DL V N + Y +L+ F I + RP + + L D V L L A
Sbjct: 100 DYTDLPTMSSFVIVNSIVGGYLTLSLPFSIVCILRPLAVPPRLFLILCDTVMMGLTLMAA 159
Query: 129 AASAELLYLAYNGDKEVTWSEACGVFGGFCRQARTSVAITF 169
+ASA ++YLA+NG+ W C FG FC+ +V +F
Sbjct: 160 SASAAIVYLAHNGNSSSNWLPVCQQFGDFCQGTSGAVVASF 200
>AT4G15620.1 | chr4:8913935-8915531 FORWARD LENGTH=191
Length = 190
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 69 TVSYSDLGGFKYLVYANGLCAAYSLASAFYIAVPRPATLSRSWVVFLL-DQVFTYLILAA 127
T S L F Y + N + Y+ S + + R + +V LL D V L+ +
Sbjct: 71 TAKASYLSAFVYNISVNAIACGYTAISIAILMISRGRRSKKLLMVVLLGDLVMVALLFSG 130
Query: 128 GAASAELLYLAYNGDKEVTWSEACGVFGGFCRQARTSVAITF 169
A++ + + +G+K V W + CGVFG FC +A S+ +T
Sbjct: 131 TGAASAIGLMGLHGNKHVMWKKVCGVFGKFCHRAAPSLPLTL 172
>AT4G25830.1 | chr4:13133727-13134790 FORWARD LENGTH=176
Length = 175
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 74/167 (44%), Gaps = 9/167 (5%)
Query: 35 RVRPVETLLRAAPLGLCVAAMAIMLRNSVTNE----YGTVSYSDLGGFKYLVYANGLCAA 90
++R E +LR + + ++ +S T E + VS+ L + +Y + + AA
Sbjct: 3 KLRETEVILRLCIVFFLLLTSCLIGLDSQTKEIAYIHKNVSFRYLLALEAELYIDVVVAA 62
Query: 91 YSLAS---AFYIAVPRPATLSRSWVVFLLDQVFTYLILAAGAASAELLYLAYNGDKEVTW 147
Y+L +Y + + + W +LLDQ Y++ A +A+A+ L G +E+ W
Sbjct: 63 YNLVQLGLGWYNVEQKTS--NPKWFSYLLDQTAAYVVFAGTSAAAQHSLLVVTGSRELQW 120
Query: 148 SEACGVFGGFCRQARTSVAITFASVACXXXXXXXXXXRLFSAYDPPQ 194
+ C F FC Q +++ + + + A LF Y P +
Sbjct: 121 MKWCYKFTRFCFQMGSAIILNYIAAALMVLLSSISAFNLFRLYSPKR 167
>AT1G14160.1 | chr1:4840798-4841660 REVERSE LENGTH=210
Length = 209
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 70 VSYSDLGGFKYLVYANGLCAAY---SLASAFYIAVPRPATLSRSWVVFLLDQVFTYLILA 126
V YSDL + V AN + Y SL + + A SR ++ ++D V L+ +
Sbjct: 88 VKYSDLPTLMFFVVANAISGGYLVLSLPVSIFHIFSTQAKTSR-IILLVVDTVMLALVSS 146
Query: 127 AGAASAELLYLAYNGDKEVTWSEACGVFGGFCRQARTSVAITFASV 172
+A+ +YLA+ G+ W C F GFC + S+ +F +V
Sbjct: 147 GASAATATVYLAHEGNTTANWPPICQQFDGFCERISGSLIGSFCAV 192
>AT2G35760.1 | chr2:15032059-15033094 FORWARD LENGTH=202
Length = 201
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 9/153 (5%)
Query: 23 SGDLQXXXXXXXRVRPVETLLRAAPLGLCVAAMAIMLRNSVTNEYGTV----SYSDLGGF 78
SG +VR E +LR L + A ++ + E + ++D+
Sbjct: 14 SGSTTKMKLIDRKVRVTELILRCLVCVLALVAAILIATDVQVREIFMIQKKAKFTDMKAL 73
Query: 79 KYLVYANGLCAAYSLASAFYIAV---PRPATLSR--SWVVFLLDQVFTYLILAAGAASAE 133
LV NG+ A YSL A V S+ +W +F DQ YL +A AA+A+
Sbjct: 74 VLLVVVNGIAAGYSLVQAVRCVVGLMKGRVLFSKPLAWAIFFGDQAVAYLCVAGVAAAAQ 133
Query: 134 LLYLAYNGDKEVTWSEACGVFGGFCRQARTSVA 166
A G+ E+ W + C ++G FC Q +A
Sbjct: 134 SAAFAKLGEPELQWMKICNMYGKFCNQVGEGIA 166
>AT5G06200.1 | chr5:1877333-1878116 FORWARD LENGTH=203
Length = 202
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 71 SYSDLGGFKYLVYANGLCAAYSLASAFY--IAVPRPATLSRSWVVFLLDQVFTYLILAAG 128
SY DL F++ V A + A Y + S + + + RP ++ ++ +LD L AA
Sbjct: 82 SYDDLPTFQFFVVAIAIVAGYLVLSLPFSVVTIVRPLAVAPRLLLLVLDTAALALDTAAA 141
Query: 129 AASAELLYLAYNGDKEVTWSEACGVFGGFCRQARTSVAITFASV 172
+A+A ++YLA+NG+ W C FG FC++ +V FASV
Sbjct: 142 SAAAAIVYLAHNGNTNTNWLPICQQFGDFCQKTSGAVVSAFASV 185
>AT1G03700.1 | chr1:921038-921844 FORWARD LENGTH=165
Length = 164
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 64/155 (41%), Gaps = 11/155 (7%)
Query: 46 APLGLCVAAMAIMLRNSVTNEYGTVSYSDLGGFKYLVYANGLCAAYSLASAFYIAVPRPA 105
A LG +A + R+S YSDL FKY V AN + YS F +P+ +
Sbjct: 20 AALGAVIAMITSRERSSFFVISLVAKYSDLAAFKYFVIANAIVTVYSFLVLF---LPKES 76
Query: 106 TLSRSWVVFLLDQVFTYLILAAGAASAELLYLAYNGDKEVTWSEACGVFGGFCRQARTSV 165
L + VV LD + T L+ ++ +A+ + + G+ W CG FC Q
Sbjct: 77 LLWKFVVV--LDLMVTMLLTSSLSAAVAVAQVGKRGNANAGWLPICGQVPRFCDQ----- 129
Query: 166 AITFASVACXXXXXXXXXXRLFSAYDPPQPSLGNK 200
IT A +A +FS + P L K
Sbjct: 130 -ITGALIAGLVALVLYVFLLIFSIHHVVDPFLLRK 163
>AT1G79780.1 | chr1:30015930-30016856 FORWARD LENGTH=188
Length = 187
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 30/150 (20%)
Query: 35 RVRPVETLLRAAPLGLCVAA----MAIMLRNSVTNEYGTVSYSDLGGFKYLVYAN----- 85
R + ++ L++ A G C+AA MA+ML + T E +D+ GFK + +N
Sbjct: 15 RRKGIKELVQVALRGGCLAASATAMAVML--TATEE----GVADIYGFKLTLSSNWSFSP 68
Query: 86 ------GLCAA---YSLAS----AFYIAVPRPATLSR--SWVVFLLDQVFTYLILAAGAA 130
G CA YSL + + P T SR +W+ F DQ+F YL+++AG+A
Sbjct: 69 SYQYVVGACAGTVLYSLLQLCLGVYRLVTGSPITPSRFQAWLCFTSDQLFCYLMMSAGSA 128
Query: 131 SAELLYLAYNGDKEVTWSEACGVFGGFCRQ 160
+ + L G + + C FC
Sbjct: 129 GSGVTNLNKTGIRHTPLPDFCKTLSSFCNH 158
>AT4G25040.1 | chr4:12868320-12869319 FORWARD LENGTH=171
Length = 170
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 39 VETLLRAAPLGLCVAAMAIMLRN-SVTNEYGTV---SYSDLGGFKYLVYAN-GLCAA--Y 91
V+ +R +G +A+M +M+ N V + YG YS F+YLVYA +CAA +
Sbjct: 17 VQVSMRVLTIGAAMASMWVMITNREVASVYGIAFEAKYSYSSAFRYLVYAQIAVCAATLF 76
Query: 92 SLASAFYIAVPRPATLSRSWVVFLLDQVFTYLILAAGAASAELLYLAYNGDKEVTWSEAC 151
+L A +AV R + + +F D + T ++A +A+ Y+ G+K+ W C
Sbjct: 77 TLVWAC-LAVRRRGLV---FALFFFDLLTTLTAISAFSAAFAEGYVGKYGNKQAGWLPIC 132
Query: 152 GVFGGFCRQARTSVAITFAS 171
G G+C + S+A++FAS
Sbjct: 133 GYVHGYCSRVTISLAMSFAS 152
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.134 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,910,964
Number of extensions: 130220
Number of successful extensions: 272
Number of sequences better than 1.0e-05: 21
Number of HSP's gapped: 261
Number of HSP's successfully gapped: 21
Length of query: 209
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 115
Effective length of database: 8,529,465
Effective search space: 980888475
Effective search space used: 980888475
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 109 (46.6 bits)