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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os04g0244900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Actin-binding FH2 domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.06 (0.0197) R2 : 0.000658
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0228 (0.0416) R2dN8 : 0.00085 R2N8 : 0.000658
σ : 0.372
deviance : 63.46
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
61.64 0.369 3.09 -0.0834 0.0539 0.0539 -0.502 1.24 -0.0191 3.28 5.198 4191 -- --
62.02 0.367 3.06 -0.0652 0.00114 -0.164 0.527 -- 0.0393 15.2 7.612 4677 -- --
62.28 0.368 3.09 -0.0723 0.0503 0.044 -- 1.24 -0.0164 3.15 5.132 4456 -- --
62.4 0.368 3.06 -0.0782 0.0197 -0.186 -- -- 0.0449 3.02 9 4737 -- --
62.42 0.368 3.09 -0.0719 -- 0.0287 -- 1.19 -0.0133 -- 5.101 4461 -- --
62.68 0.371 3.06 -0.0477 0.0475 -- -0.444 -- 0.0148 3.39 -- -- -- --
63.3 0.373 3.06 -0.0395 0.0458 -- -- -- 0.0174 3.64 -- -- -- --
62.38 0.368 3.06 -0.1 -- -0.199 -- -- 0.0476 -- 9.045 4758 -- --
62.62 0.369 3.05 -- 0.0239 -0.162 -- -- 0.0497 5.06 9.199 4726 -- --
63.42 0.372 3.06 -0.0376 -- -- -- -- 0.0186 -- -- -- -- --
63.35 0.372 3.06 -- 0.045 -- -- -- 0.0218 3.65 -- -- -- --
62.64 0.369 3.06 -- -- -0.168 -- -- 0.0503 -- 9.1 4751 -- --
63.46 0.372 3.06 -- -- -- -- -- 0.0228 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 58.04 radiation 30.0 43200 < th dose dependent rect. 23 1
9 58.45 temperature 25.0 10 > th dose independent rect. 22 1
12 58.46 wind 9.0 1440 < th dose independent rect. 23 1
13 58.46 temperature 10.0 1440 > th dose independent rect. 23 1
16 58.46 temperature 30.0 1440 < th dose independent rect. 23 1
20 58.46 humidity 50.0 1440 > th dose independent rect. 23 1
30 58.46 atmosphere 995.0 1440 > th dose independent rect. 23 1
31 58.46 radiation 1.0 1440 < th dose independent rect. 23 1
51 58.46 temperature 10.0 1440 > th dose independent rect. 24 23
54 58.46 radiation 1.0 1440 < th dose dependent rect. 23 1
61 58.49 wind 3.0 30 < th dose independent rect. 22 1
62 58.49 temperature 25.0 30 > th dose dependent rect. 22 1
64 58.53 humidity 80.0 30 > th dose independent rect. 22 1
65 58.53 atmosphere 1005.0 30 > th dose dependent rect. 22 1
68 58.57 humidity 90.0 30 < th dose independent rect. 22 1
69 58.57 wind 5.0 30 < th dose dependent rect. 22 1
73 58.60 atmosphere 1005.0 30 > th dose independent rect. 22 1
77 58.62 wind 1.0 30 > th dose independent rect. 22 1
81 58.64 temperature 10.0 30 > th dose independent rect. 22 1
83 58.64 temperature 30.0 30 < th dose independent rect. 22 1
84 58.64 humidity 50.0 30 > th dose independent rect. 22 1
87 58.64 atmosphere 995.0 30 > th dose independent rect. 22 1
89 58.64 atmosphere 1010.0 30 < th dose independent rect. 22 1
91 58.64 radiation 1.0 30 < th dose independent rect. 22 1
96 58.64 precipitation 0.1 30 < th dose independent rect. 22 1
97 58.64 temperature 10.0 30 > th dose independent rect. 23 23
99 58.64 humidity 50.0 30 > th dose dependent rect. 22 1
102 58.64 radiation 1.0 30 < th dose dependent rect. 22 1
107 58.64 precipitation 0.1 30 < th dose dependent rect. 22 1
111 58.74 atmosphere 1015.0 30 < th dose dependent rect. 22 1
113 58.76 humidity 80.0 90 < th dose independent rect. 1 6
116 58.78 humidity 90.0 30 < th dose dependent rect. 22 1
117 58.81 atmosphere 1000.0 30 > th dose independent rect. 23 23
120 58.87 wind 1.0 30 > th dose dependent rect. 22 1
124 58.93 temperature 30.0 30 < th dose dependent rect. 22 1
132 59.04 humidity 90.0 90 < th dose dependent rect. 1 7
172 59.22 precipitation 0.1 30 < th dose independent rect. 23 23
173 59.22 precipitation 0.1 30 < th dose dependent rect. 23 23
176 59.26 humidity 80.0 90 < th dose independent rect. 6 2
184 59.36 humidity 80.0 90 < th dose dependent rect. 5 3
188 59.38 humidity 80.0 90 < th dose dependent rect. 7 1
190 59.38 humidity 80.0 10 < th dose dependent rect. 5 3
194 59.39 humidity 80.0 10 < th dose dependent rect. 7 1
215 59.43 humidity 50.0 30 > th dose independent rect. 23 23
219 59.48 wind 9.0 30 < th dose independent rect. 23 23
225 59.53 radiation 20.0 90 > th dose dependent rect. 16 16
226 59.55 precipitation 0.1 1440 < th dose independent rect. 23 1
227 59.55 atmosphere 995.0 720 > th dose independent rect. 11 16
228 59.55 precipitation 0.1 1440 < th dose dependent rect. 23 1
229 59.56 atmosphere 995.0 720 > th dose independent rect. 23 16
230 59.57 humidity 50.0 720 > th dose independent rect. 3 8
231 59.57 precipitation 0.1 720 < th dose independent rect. 15 8
232 59.57 precipitation 0.1 720 < th dose dependent rect. 15 8
233 59.59 temperature 10.0 720 > th dose independent rect. 3 8
234 59.59 atmosphere 995.0 720 > th dose independent rect. 3 8
235 59.59 atmosphere 995.0 720 > th dose independent rect. 15 8
236 59.59 temperature 10.0 720 > th dose independent rect. 11 16
241 59.61 radiation 20.0 90 > th dose independent rect. 6 1
255 59.61 radiation 20.0 90 > th dose dependent rect. 6 1
267 59.61 humidity 80.0 10 < th dose dependent rect. 20 12
270 59.61 humidity 70.0 90 < th dose dependent rect. 18 14
273 59.62 temperature 10.0 720 > th dose independent rect. 15 8
274 59.62 temperature 10.0 720 > th dose independent rect. 23 16
279 59.64 humidity 70.0 90 < th dose independent rect. 18 14
287 59.67 humidity 80.0 10 < th dose independent rect. 6 2
288 59.67 precipitation 0.1 720 < th dose independent rect. 11 16
307 59.67 precipitation 0.1 720 < th dose dependent rect. 11 16
308 59.67 radiation 30.0 10 > th dose dependent rect. 15 18
315 59.68 humidity 70.0 90 < th dose dependent rect. 19 12
371 59.69 humidity 70.0 90 < th dose independent rect. 19 12
741 59.85 temperature 25.0 90 > th dose dependent rect. 2 2
759 59.87 temperature 25.0 90 > th dose independent rect. 1 3
776 59.88 atmosphere 1005.0 30 > th dose dependent rect. 1 4
781 59.89 radiation 1.0 43200 < th dose dependent rect. 3 1
785 59.90 radiation 30.0 720 > th dose independent rect. 15 17
825 59.95 wind 9.0 720 < th dose independent rect. 3 8
831 59.97 humidity 80.0 720 < th dose dependent rect. 24 2
833 59.98 humidity 80.0 720 < th dose independent rect. 1 1
843 60.00 atmosphere 1005.0 10 > th dose independent rect. 2 1
879 60.04 atmosphere 1000.0 10 > th dose independent rect. 3 23
889 60.09 wind 3.0 10 < th dose independent rect. 2 1
890 60.09 atmosphere 1005.0 30 > th dose dependent rect. 7 1
892 60.10 wind 1.0 30 > th dose independent rect. 2 1
899 60.12 temperature 25.0 270 > th dose independent rect. 1 1
913 60.15 temperature 30.0 30 < th dose dependent rect. 2 1
957 60.19 temperature 10.0 30 > th dose independent rect. 2 1
959 60.19 temperature 30.0 30 < th dose independent rect. 2 1
960 60.19 humidity 50.0 30 > th dose independent rect. 2 1
968 60.19 atmosphere 1010.0 30 < th dose independent rect. 2 1
970 60.19 radiation 1.0 30 < th dose independent rect. 2 1
975 60.19 precipitation 0.1 30 < th dose independent rect. 2 1
986 60.19 temperature 10.0 30 > th dose independent rect. 3 23
990 60.19 radiation 1.0 30 < th dose dependent rect. 2 1
995 60.19 precipitation 0.1 30 < th dose dependent rect. 2 1