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Os04g0201800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.81 (0.0527) R2 : 0.814
β1 : 2.06 (0.309) R2dD : 0.0753 R2D : 0.268
β2 : 2.38 (0.111) R2dC : 0.195 R2C : 0.243
β3 : 2.6 (0.149) R2dE : 0.18 R2E : 0.292
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -6.61 (0.829) R2dD*E : 0.102 R2D*E : 0.261
γ1 : -0.475 (0.124) R2dN8 : 0.0148 R2N8 : -0.0273
σ : 0.783
deviance : 282.4
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C
peak time of C : 5.61
E
wheather : temperature
threshold : 19.41
memory length : 4711
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 4.87
open length of G : 1.32

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
282.4 0.79 6.81 2.02 2.38 2.62 0.359 -6.73 -0.483 5.62 19.39 4697 4.9 1.3
326.52 0.842 6.71 2.53 2.47 2.91 0.221 -- -0.58 5.81 16.2 16272 4.65 1.14
282.4 0.783 6.81 2.06 2.38 2.6 -- -6.61 -0.475 5.61 19.41 4711 4.87 1.32
323.43 0.838 6.71 2.69 2.47 3.07 -- -- -0.576 5.74 16.1 16279 4.56 1.11
547.62 1.09 6.85 2.22 -- 3.03 -- -5.94 -0.52 -- 18.76 4748 4.73 0.0333
471.46 1.02 6.41 4.95 2.69 -- 0.00294 -- 0.781 5.86 -- -- -- --
471.46 1.02 6.41 4.95 2.69 -- -- -- 0.781 5.86 -- -- -- --
603.79 1.14 6.87 2.94 -- 3.11 -- -- -0.544 -- 18.15 3318 4.57 0.183
350.45 0.872 6.8 -- 2.7 4.37 -- -- -1.02 5.98 7.167 47520 5.04 0.0167
845.3 1.36 6.46 5.03 -- -- -- -- 0.844 -- -- -- -- --
1117.69 1.56 6.54 -- 2.76 -- -- -- 0.23 5.78 -- -- -- --
521.93 1.06 6.88 -- -- 6.3 -- -- -1.29 -- -5.537 12176 0.433 1.17
1513.54 1.82 6.58 -- -- -- -- -- 0.285 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 287.89 humidity 80 43200 > th dose dependent rect. 10 16
5 289.27 humidity 80 43200 > th dose independent rect. 13 1
6 289.51 humidity 90 43200 < th dose independent rect. 22 2
10 289.99 humidity 80 43200 > th dose dependent sin 17 NA
13 290.60 humidity 90 43200 > th dose dependent rect. 9 21
15 290.64 humidity 90 43200 > th dose dependent rect. 20 19
24 290.78 humidity 90 43200 > th dose dependent rect. 13 20
35 290.90 humidity 90 43200 > th dose dependent rect. 19 16
49 291.00 humidity 90 43200 < th dose independent rect. 18 7
52 291.03 humidity 90 43200 > th dose independent rect. 14 12
53 291.03 humidity 90 43200 > th dose dependent rect. 16 18
72 291.10 humidity 90 43200 > th dose independent rect. 16 10
79 291.14 humidity 90 43200 < th dose independent rect. 14 12
120 291.39 humidity 80 43200 < th dose independent rect. 13 1
125 291.46 humidity 90 43200 < th dose independent rect. 16 10
133 291.53 humidity 90 43200 > th dose dependent sin 15 NA
151 291.66 humidity 90 43200 > th dose dependent no NA NA
158 291.70 humidity 90 43200 > th dose dependent rect. 19 7
159 291.71 humidity 90 43200 > th dose dependent sin 7 NA
162 291.73 humidity 90 43200 > th dose independent sin 16 NA
178 291.98 humidity 90 43200 > th dose independent rect. 9 19
183 292.00 humidity 90 43200 > th dose independent rect. 9 21
190 292.09 temperature 15 43200 < th dose independent rect. 2 1
203 292.23 temperature 15 43200 > th dose independent rect. 2 2
205 292.25 humidity 90 43200 < th dose independent sin 16 NA
209 292.30 humidity 90 43200 < th dose independent rect. 11 16
256 292.74 radiation 40 43200 < th dose independent rect. 6 2
266 292.84 humidity 90 43200 > th dose dependent rect. 16 11
276 292.93 humidity 90 43200 < th dose independent rect. 9 19
282 292.96 radiation 40 43200 < th dose independent rect. 1 7
293 293.04 humidity 90 43200 > th dose independent rect. 14 21
304 293.15 humidity 90 43200 > th dose independent rect. 16 19
308 293.16 humidity 90 43200 > th dose independent rect. 19 20
316 293.19 humidity 90 43200 > th dose independent rect. 19 17
323 293.24 radiation 40 43200 < th dose independent rect. 18 14
341 293.35 radiation 40 43200 < th dose independent rect. 21 11
364 293.46 temperature 15 43200 < th dose independent rect. 1 4
487 294.30 humidity 90 43200 > th dose independent no NA NA
531 294.61 humidity 90 43200 > th dose dependent rect. 3 5
540 294.68 radiation 1 43200 < th dose dependent rect. 9 2
543 294.69 radiation 1 43200 > th dose independent rect. 10 1
548 294.73 humidity 90 43200 > th dose independent rect. 23 23
569 294.94 radiation 1 43200 < th dose independent rect. 10 1
584 295.08 radiation 1 43200 > th dose independent rect. 8 3
586 295.08 radiation 30 43200 > th dose dependent rect. 7 1
630 295.29 radiation 1 43200 < th dose independent rect. 8 3
713 295.83 humidity 90 43200 < th dose independent rect. 14 22
717 295.88 temperature 15 43200 > th dose independent sin 8 NA
721 295.91 humidity 90 43200 < th dose independent rect. 16 20
728 295.98 humidity 90 43200 < th dose independent rect. 18 21
861 296.71 humidity 90 43200 < th dose independent no NA NA
877 296.78 humidity 90 43200 > th dose independent sin 7 NA
899 296.92 humidity 90 43200 < th dose independent rect. 21 23
908 296.97 temperature 15 43200 < th dose independent sin 8 NA