Os04g0190000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0190000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.38 | 0.429 | 3.02 | 0.149 | 0.222 | 0.658 | 0.765 | 1.63 | 0.0332 | 4.9 | 1015 | 4055 | -- | -- |
| 85.74 | 0.431 | 3.01 | 0.268 | 0.206 | 0.396 | 0.635 | -- | 0.0547 | 4.74 | 1013 | 3572 | -- | -- |
| 84.51 | 0.428 | 3.03 | 0.178 | 0.236 | 1.26 | -- | 2.79 | 0.031 | 5.83 | 1016 | 4074 | -- | -- |
| 86.74 | 0.434 | 3 | 0.273 | 0.223 | 0.388 | -- | -- | 0.0576 | 5.52 | 1013 | 3612 | -- | -- |
| 87.32 | 0.435 | 3.03 | 0.19 | -- | 1.29 | -- | 2.89 | 0.0391 | -- | 1016 | 4080 | -- | -- |
| 88.24 | 0.44 | 3.01 | 0.238 | 0.203 | -- | 0.672 | -- | 0.0201 | 4.74 | -- | -- | -- | -- |
| 89.27 | 0.442 | 3.01 | 0.236 | 0.217 | -- | -- | -- | 0.0169 | 5.63 | -- | -- | -- | -- |
| 89.44 | 0.44 | 3.01 | 0.273 | -- | 0.376 | -- | -- | 0.059 | -- | 1013 | 3560 | -- | -- |
| 88.56 | 0.438 | 3.01 | -- | 0.231 | 0.382 | -- | -- | 0.0217 | 5.51 | 1013 | 3572 | -- | -- |
| 91.71 | 0.447 | 3.02 | 0.243 | -- | -- | -- | -- | 0.0221 | -- | -- | -- | -- | -- |
| 90.73 | 0.446 | 3.02 | -- | 0.221 | -- | -- | -- | -0.00941 | 5.58 | -- | -- | -- | -- |
| 91.32 | 0.445 | 3.02 | -- | -- | 0.364 | -- | -- | 0.0227 | -- | 1013 | 3526 | -- | -- |
| 93.27 | 0.451 | 3.02 | -- | -- | -- | -- | -- | -0.00488 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 69.72 | wind | 3.0 | 270 | > th | dose dependent | rect. | 1 | 2 |
| 3 | 70.11 | wind | 5.0 | 270 | > th | dose independent | rect. | 1 | 2 |
| 4 | 70.53 | wind | 5.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 8 | 71.00 | wind | 5.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 31 | 74.27 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 1 |
| 32 | 74.27 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 24 | 1 |
| 114 | 76.95 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 21 | 2 |
| 115 | 76.95 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 21 | 2 |
| 169 | 78.48 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 19 | 6 |
| 172 | 78.54 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 19 | 6 |
| 193 | 78.82 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 21 | 5 |
| 195 | 78.82 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 21 | 5 |
| 279 | 79.51 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 20 | 7 |
| 280 | 79.51 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 20 | 7 |
| 292 | 79.73 | wind | 7.0 | 1440 | < th | dose independent | rect. | 21 | 5 |
| 311 | 80.03 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 320 | 80.03 | wind | 5.0 | 720 | < th | dose independent | rect. | 23 | 9 |
| 329 | 80.03 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 350 | 80.11 | wind | 7.0 | 1440 | < th | dose independent | rect. | 21 | 7 |
| 355 | 80.20 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 21 | 5 |
| 358 | 80.20 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 21 | 5 |
| 363 | 80.22 | wind | 7.0 | 720 | > th | dose independent | rect. | 21 | 1 |
| 394 | 80.24 | wind | 7.0 | 720 | > th | dose dependent | rect. | 21 | 1 |
| 455 | 80.47 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 23 | 2 |
| 457 | 80.47 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 23 | 2 |
| 474 | 80.57 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 20 | 17 |
| 478 | 80.57 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 20 | 17 |
| 496 | 80.63 | wind | 7.0 | 1440 | < th | dose independent | rect. | 24 | 2 |
| 623 | 81.32 | wind | 3.0 | 90 | < th | dose dependent | rect. | 19 | 1 |
| 742 | 81.56 | wind | 7.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 809 | 81.74 | wind | 3.0 | 90 | < th | dose independent | rect. | 19 | 1 |
| 832 | 81.82 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 20 | 15 |
| 833 | 81.82 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 20 | 15 |
| 861 | 81.92 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 24 | 3 |
| 908 | 82.08 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 1 | 5 |
| 949 | 82.25 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 20 | 11 |
| 950 | 82.25 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 20 | 11 |