Os04g0117200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Spectrin repeat containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0117200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Spectrin repeat containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28.24 | 0.25 | 8.97 | 0.0491 | 0.255 | 0.659 | 0.0454 | 1.09 | 0.00665 | 14.5 | 10.22 | 3836 | -- | -- |
| 28.85 | 0.25 | 9.01 | -0.179 | 0.223 | 0.525 | 0.00124 | -- | -0.0574 | 14.5 | 19.8 | 4878 | -- | -- |
| 28.24 | 0.248 | 8.97 | 0.0487 | 0.254 | 0.66 | -- | 1.08 | 0.00625 | 14.4 | 10.07 | 3814 | -- | -- |
| 28.84 | 0.25 | 9 | -0.171 | 0.232 | 0.53 | -- | -- | -0.0511 | 14.9 | 19.7 | 4422 | -- | -- |
| 31.48 | 0.261 | 8.97 | 0.067 | -- | 0.602 | -- | 1.05 | 0.00551 | -- | 10.49 | 3300 | -- | -- |
| 36.06 | 0.282 | 8.98 | 0.0735 | 0.207 | -- | -0.0131 | -- | 0.0601 | 14.9 | -- | -- | -- | -- |
| 36.06 | 0.281 | 8.98 | 0.0732 | 0.207 | -- | -- | -- | 0.06 | 14.9 | -- | -- | -- | -- |
| 31.61 | 0.262 | 9.01 | -0.176 | -- | 0.512 | -- | -- | -0.0538 | -- | 19.89 | 4774 | -- | -- |
| 29.33 | 0.252 | 9 | -- | 0.236 | 0.466 | -- | -- | -0.0229 | 14.4 | 21.01 | 3463 | -- | -- |
| 38.54 | 0.29 | 8.98 | 0.0643 | -- | -- | -- | -- | 0.0547 | -- | -- | -- | -- | -- |
| 36.2 | 0.281 | 8.98 | -- | 0.206 | -- | -- | -- | 0.0519 | 14.9 | -- | -- | -- | -- |
| 31.95 | 0.263 | 8.98 | -- | -- | 0.428 | -- | -- | 0.0504 | -- | 25.69 | 4812 | -- | -- |
| 38.64 | 0.29 | 8.98 | -- | -- | -- | -- | -- | 0.0475 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.96 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 2 | 27.04 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 3 | 27.05 | temperature | 15 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 6 | 27.07 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 7 | 27.07 | temperature | 20 | 4320 | > th | dose dependent | rect. | 1 | 3 |
| 12 | 27.10 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 3 |
| 326 | 27.48 | temperature | 10 | 4320 | > th | dose dependent | sin | 11 | NA |
| 328 | 27.48 | temperature | 30 | 4320 | < th | dose dependent | sin | 11 | NA |
| 908 | 28.08 | temperature | 25 | 4320 | < th | dose independent | rect. | 5 | 2 |
| 940 | 28.10 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 954 | 28.11 | temperature | 25 | 4320 | > th | dose independent | rect. | 5 | 3 |