Os04g0111500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Exo70 exocyst complex subunit family protein.
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Os04g0111500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Exo70 exocyst complex subunit family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.02 | 0.244 | 10.9 | 0.232 | 1.31 | 0.59 | -0.771 | -1.15 | 0.191 | 21.7 | 49.37 | 731 | -- | -- |
| 28.43 | 0.248 | 10.9 | 0.197 | 1.27 | 0.484 | -0.568 | -- | 0.178 | 21.7 | 46.74 | 766 | -- | -- |
| 28.52 | 0.251 | 10.9 | 0.173 | 0.99 | 0.467 | -- | -0.658 | 0.178 | 21 | 49.37 | 731 | -- | -- |
| 28.81 | 0.25 | 10.9 | 0.186 | 1.29 | 0.525 | -- | -- | 0.178 | 21.7 | 46.79 | 766 | -- | -- |
| 81.87 | 0.424 | 10.8 | 0.178 | -- | 0.573 | -- | -0.647 | 0.209 | -- | 66 | 1509 | -- | -- |
| 31.77 | 0.264 | 10.9 | 0.143 | 1.07 | -- | -0.439 | -- | 0.167 | 22 | -- | -- | -- | -- |
| 32.52 | 0.267 | 10.9 | 0.16 | 1.07 | -- | -- | -- | 0.167 | 22 | -- | -- | -- | -- |
| 83.3 | 0.427 | 10.8 | 0.153 | -- | 0.561 | -- | -- | 0.202 | -- | 65.36 | 5152 | -- | -- |
| 29.71 | 0.254 | 10.9 | -- | 1.28 | 0.507 | -- | -- | 0.157 | 21.8 | 46.45 | 766 | -- | -- |
| 101.49 | 0.471 | 10.8 | 0.173 | -- | -- | -- | -- | 0.168 | -- | -- | -- | -- | -- |
| 33.19 | 0.27 | 10.9 | -- | 1.07 | -- | -- | -- | 0.15 | 22 | -- | -- | -- | -- |
| 83.92 | 0.428 | 10.8 | -- | -- | 0.563 | -- | -- | 0.185 | -- | 65.36 | 5152 | -- | -- |
| 102.28 | 0.472 | 10.9 | -- | -- | -- | -- | -- | 0.149 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.47 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 2 | 25.47 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 3 |
| 5 | 25.53 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 6 | 25.59 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 37 | 26.15 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 40 | 26.15 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 47 | 26.22 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 61 | 26.32 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 2 | 12 |
| 75 | 26.37 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 84 | 26.41 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 108 | 26.48 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 1 | 14 |
| 118 | 26.52 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 11 |
| 121 | 26.52 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 15 |
| 122 | 26.52 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 19 |
| 140 | 26.56 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 11 | 13 |
| 164 | 26.61 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 175 | 26.63 | humidity | 80.0 | 1440 | < th | dose independent | sin | 3 | NA |
| 184 | 26.65 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 9 |
| 203 | 26.72 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 205 | 26.73 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 8 | 20 |
| 206 | 26.73 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 7 | 22 |
| 208 | 26.74 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 10 | 18 |
| 224 | 26.80 | humidity | 80.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 229 | 26.81 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 19 | NA |
| 232 | 26.81 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 24 | 23 |
| 304 | 26.96 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 11 | 21 |
| 307 | 26.97 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 19 | 21 |
| 314 | 26.98 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 318 | 26.99 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 321 | 26.99 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 340 | 27.02 | radiation | 1.0 | 720 | < th | dose independent | rect. | 9 | 10 |
| 345 | 27.03 | humidity | 50.0 | 720 | > th | dose dependent | no | NA | NA |
| 362 | 27.06 | humidity | 80.0 | 720 | > th | dose independent | rect. | 1 | 19 |
| 366 | 27.06 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 378 | 27.08 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 12 | 16 |
| 386 | 27.08 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 458 | 27.13 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 10 | 23 |
| 466 | 27.15 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 11 | 9 |
| 467 | 27.15 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 8 | 15 |
| 469 | 27.15 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 11 | 19 |
| 495 | 27.18 | radiation | 1.0 | 720 | < th | dose independent | rect. | 9 | 18 |
| 510 | 27.18 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 512 | 27.18 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 23 | 23 |
| 519 | 27.19 | humidity | 90.0 | 720 | < th | dose dependent | no | NA | NA |
| 530 | 27.19 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 2 | 23 |
| 564 | 27.21 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 588 | 27.23 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 589 | 27.23 | humidity | 80.0 | 720 | > th | dose independent | rect. | 7 | 14 |
| 590 | 27.23 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 17 |
| 622 | 27.24 | humidity | 90.0 | 720 | < th | dose dependent | sin | 20 | NA |
| 631 | 27.24 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 650 | 27.26 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 661 | 27.26 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 12 | 10 |
| 672 | 27.26 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 681 | 27.27 | humidity | 50.0 | 720 | > th | dose dependent | sin | 20 | NA |
| 684 | 27.27 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 685 | 27.27 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 13 | 3 |
| 763 | 27.29 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 12 | 5 |
| 952 | 27.36 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 956 | 27.37 | humidity | 70.0 | 10 | > th | dose dependent | no | NA | NA |
| 965 | 27.37 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 971 | 27.38 | humidity | 80.0 | 720 | > th | dose independent | rect. | 9 | 11 |