Os04g0105300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1295 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0105300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF1295 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 110.26 | 0.493 | 7.96 | 0.659 | 2.56 | 1.32 | 2.58 | -1.79 | 0.663 | 20 | 34.97 | 7056 | -- | -- |
| 114.3 | 0.498 | 8.01 | 0.421 | 2.58 | 1.45 | 2.58 | -- | 0.64 | 20 | 37.94 | 10878 | -- | -- |
| 129.3 | 0.53 | 7.96 | 0.639 | 2.61 | 1.36 | -- | -1.82 | 0.667 | 19.9 | 29.28 | 6605 | -- | -- |
| 132.6 | 0.536 | 8 | 0.496 | 2.59 | 1.57 | -- | -- | 0.667 | 19.9 | 25.1 | 10789 | -- | -- |
| 487.72 | 1.03 | 7.89 | 0.547 | -- | 1.33 | -- | -1.51 | 0.672 | -- | 42.13 | 8622 | -- | -- |
| 148.08 | 0.57 | 8.11 | -0.465 | 2.56 | -- | 2.51 | -- | 0.18 | 20 | -- | -- | -- | -- |
| 166.36 | 0.604 | 8.11 | -0.53 | 2.57 | -- | -- | -- | 0.184 | 19.8 | -- | -- | -- | -- |
| 484.81 | 1.03 | 7.98 | -0.219 | -- | 1.51 | -- | -- | 0.442 | -- | 25.1 | 10789 | -- | -- |
| 133.25 | 0.538 | 8.03 | -- | 2.6 | 1.32 | -- | -- | 0.536 | 19.9 | 38.55 | 7919 | -- | -- |
| 524.75 | 1.07 | 8.05 | -0.56 | -- | -- | -- | -- | 0.149 | -- | -- | -- | -- | -- |
| 173.77 | 0.617 | 8.1 | -- | 2.57 | -- | -- | -- | 0.243 | 19.8 | -- | -- | -- | -- |
| 485.98 | 1.03 | 7.97 | -- | -- | 1.58 | -- | -- | 0.478 | -- | 25.1 | 10789 | -- | -- |
| 533.01 | 1.08 | 8.03 | -- | -- | -- | -- | -- | 0.211 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 103.17 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 17 |
| 4 | 104.46 | temperature | 15.0 | 10 | > th | dose dependent | sin | 7 | NA |
| 40 | 109.78 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 3 |
| 41 | 109.80 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 3 |
| 42 | 109.80 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 5 |
| 43 | 109.81 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 44 | 109.81 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 3 |
| 46 | 109.91 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 47 | 109.92 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 49 | 109.98 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 5 |
| 69 | 110.24 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 7 |
| 80 | 110.41 | temperature | 30.0 | 10 | < th | dose dependent | sin | 7 | NA |
| 86 | 110.47 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 7 |
| 87 | 110.48 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 7 |
| 88 | 110.48 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 7 |
| 181 | 111.02 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 191 | 111.04 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 12 | 12 |
| 192 | 111.04 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 193 | 111.04 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 6 | 2 |
| 197 | 111.05 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 201 | 111.06 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 205 | 111.06 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 8 | 17 |
| 215 | 111.08 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 224 | 111.10 | temperature | 20.0 | 43200 | > th | dose independent | sin | 17 | NA |
| 226 | 111.10 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 234 | 111.11 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 6 | 4 |
| 241 | 111.12 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 8 | 18 |
| 254 | 111.14 | temperature | 20.0 | 43200 | < th | dose independent | sin | 17 | NA |
| 278 | 111.16 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 23 | 18 |
| 297 | 111.18 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 302 | 111.18 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 309 | 111.19 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 322 | 111.19 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 2 | 8 |
| 389 | 111.23 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 399 | 111.23 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 401 | 111.23 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 416 | 111.23 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 437 | 111.24 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 19 | 9 |
| 449 | 111.24 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 19 | 11 |
| 466 | 111.24 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 23 | 16 |
| 488 | 111.25 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 19 | 9 |
| 489 | 111.25 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 21 | 9 |
| 527 | 111.26 | temperature | 25.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 571 | 111.27 | temperature | 10.0 | 43200 | > th | dose dependent | sin | 10 | NA |
| 707 | 111.30 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 856 | 111.33 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 1 |