Os03g0859800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ovarian tumour, otubain domain containing protein.
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Os03g0859800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ovarian tumour, otubain domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.84 | 0.332 | 10 | -0.00727 | 1.1 | -0.941 | -0.669 | 1.21 | 0.162 | 22.5 | 22.7 | 783 | -- | -- |
| 51.29 | 0.334 | 10 | 0.0958 | 1.1 | -1.18 | -0.766 | -- | 0.198 | 22.5 | 22.32 | 742 | -- | -- |
| 51.42 | 0.334 | 10 | -0.0351 | 1.11 | -0.87 | -- | 1.65 | 0.156 | 22.5 | 22.7 | 778 | -- | -- |
| 54.38 | 0.343 | 10 | 0.144 | 1.09 | -1.25 | -- | -- | 0.195 | 22.5 | 21.98 | 776 | -- | -- |
| 121.12 | 0.513 | 10.1 | -0.324 | -- | -1.26 | -- | 1.57 | 0.0365 | -- | 25.97 | 765 | -- | -- |
| 67.17 | 0.384 | 9.98 | 0.422 | 1.2 | -- | -0.987 | -- | 0.357 | 22.6 | -- | -- | -- | -- |
| 71.17 | 0.395 | 9.98 | 0.462 | 1.21 | -- | -- | -- | 0.36 | 22.5 | -- | -- | -- | -- |
| 123.44 | 0.517 | 10 | -0.0139 | -- | -1.74 | -- | -- | 0.0663 | -- | 22.65 | 823 | -- | -- |
| 54.85 | 0.345 | 10 | -- | 1.08 | -1.34 | -- | -- | 0.173 | 22.5 | 21.9 | 776 | -- | -- |
| 160.85 | 0.593 | 9.94 | 0.483 | -- | -- | -- | -- | 0.365 | -- | -- | -- | -- | -- |
| 76.8 | 0.41 | 9.99 | -- | 1.21 | -- | -- | -- | 0.308 | 22.5 | -- | -- | -- | -- |
| 122.99 | 0.517 | 10 | -- | -- | -1.79 | -- | -- | 0.101 | -- | 22.4 | 787 | -- | -- |
| 167.02 | 0.603 | 9.96 | -- | -- | -- | -- | -- | 0.311 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.43 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 10 |
| 2 | 47.50 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 12 |
| 6 | 47.78 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 9 |
| 8 | 47.84 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 6 |
| 10 | 47.87 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 8 |
| 13 | 47.90 | temperature | 20 | 720 | > th | dose independent | sin | 9 | NA |
| 22 | 48.07 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 6 |
| 26 | 48.12 | temperature | 20 | 720 | < th | dose independent | sin | 7 | NA |
| 27 | 48.12 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 8 |
| 29 | 48.13 | temperature | 25 | 720 | < th | dose dependent | sin | 7 | NA |
| 45 | 48.28 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 6 |
| 69 | 48.50 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 16 |
| 84 | 48.67 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 16 |
| 118 | 48.86 | temperature | 20 | 720 | < th | dose dependent | rect. | 21 | 9 |
| 127 | 48.89 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 18 |
| 137 | 48.95 | temperature | 20 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 162 | 49.04 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 20 |
| 181 | 49.13 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 21 |
| 239 | 49.40 | temperature | 10 | 720 | > th | dose dependent | sin | 9 | NA |
| 341 | 49.81 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 2 |
| 682 | 51.10 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 706 | 51.20 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 777 | 51.47 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 23 |
| 831 | 51.70 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 23 |
| 838 | 51.72 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 23 |
| 905 | 51.88 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 5 |
| 941 | 52.00 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 2 |
| 945 | 52.01 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 23 |