Os03g0851500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0851500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.49 | 0.34 | 10.2 | -0.674 | 0.281 | -0.812 | -0.82 | 0.394 | 0.644 | 1.45 | 1011 | 3311 | -- | -- |
| 52.81 | 0.338 | 10.2 | -0.583 | 0.279 | -0.897 | -0.832 | -- | 0.668 | 1.46 | 1011 | 3056 | -- | -- |
| 54.41 | 0.344 | 10.2 | -0.662 | 0.295 | -0.806 | -- | 0.492 | 0.684 | 2.61 | 1011 | 3093 | -- | -- |
| 54.91 | 0.345 | 10.1 | -0.564 | 0.309 | -0.879 | -- | -- | 0.673 | 2.79 | 1011 | 3054 | -- | -- |
| 59.76 | 0.36 | 10.2 | -0.65 | -- | -0.861 | -- | 0.43 | 0.67 | -- | 1011 | 3098 | -- | -- |
| 73.54 | 0.402 | 10.1 | -0.35 | 0.341 | -- | -0.792 | -- | 0.833 | 2.03 | -- | -- | -- | -- |
| 75.41 | 0.407 | 10.1 | -0.328 | 0.362 | -- | -- | -- | 0.836 | 3.07 | -- | -- | -- | -- |
| 60.25 | 0.362 | 10.1 | -0.558 | -- | -0.911 | -- | -- | 0.695 | -- | 1011 | 2900 | -- | -- |
| 62.47 | 0.368 | 10.1 | -- | 0.306 | -0.791 | -- | -- | 0.758 | 2.87 | 1011 | 3089 | -- | -- |
| 82.89 | 0.425 | 10.1 | -0.313 | -- | -- | -- | -- | 0.845 | -- | -- | -- | -- | -- |
| 78.25 | 0.414 | 10.1 | -- | 0.355 | -- | -- | -- | 0.872 | 3.07 | -- | -- | -- | -- |
| 67.82 | 0.384 | 10.1 | -- | -- | -0.834 | -- | -- | 0.76 | -- | 1011 | 3041 | -- | -- |
| 85.47 | 0.432 | 10.1 | -- | -- | -- | -- | -- | 0.88 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 50.68 | humidity | 50 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 2 | 50.76 | humidity | 60 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 9 | 51.33 | humidity | 50 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 13 | 51.46 | humidity | 60 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 23 | 51.63 | humidity | 70 | 14400 | < th | dose dependent | rect. | 19 | 12 |
| 31 | 51.76 | humidity | 50 | 43200 | < th | dose dependent | rect. | 20 | 17 |
| 33 | 51.77 | humidity | 50 | 43200 | < th | dose dependent | rect. | 4 | 9 |
| 44 | 51.80 | humidity | 50 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 53 | 51.83 | atmosphere | 1010 | 4320 | > th | dose independent | rect. | 11 | 3 |
| 67 | 51.86 | humidity | 70 | 14400 | < th | dose dependent | rect. | 19 | 3 |
| 87 | 51.88 | humidity | 60 | 43200 | > th | dose independent | rect. | 16 | 22 |
| 99 | 51.91 | atmosphere | 1010 | 4320 | < th | dose independent | rect. | 11 | 3 |
| 130 | 52.00 | humidity | 60 | 43200 | < th | dose independent | rect. | 15 | 23 |
| 140 | 52.01 | humidity | 50 | 43200 | < th | dose dependent | rect. | 11 | 21 |
| 142 | 52.02 | humidity | 60 | 43200 | < th | dose independent | rect. | 12 | 23 |
| 146 | 52.03 | humidity | 60 | 43200 | > th | dose independent | sin | 4 | NA |
| 150 | 52.03 | humidity | 60 | 43200 | < th | dose independent | rect. | 17 | 23 |
| 163 | 52.06 | humidity | 60 | 43200 | > th | dose independent | rect. | 4 | 10 |
| 165 | 52.06 | humidity | 60 | 43200 | > th | dose independent | rect. | 3 | 23 |
| 167 | 52.06 | humidity | 50 | 43200 | < th | dose dependent | sin | 3 | NA |
| 170 | 52.07 | humidity | 60 | 43200 | > th | dose independent | no | NA | NA |
| 194 | 52.08 | humidity | 60 | 43200 | < th | dose independent | rect. | 3 | 21 |
| 213 | 52.09 | humidity | 60 | 43200 | > th | dose independent | rect. | 7 | 23 |
| 214 | 52.09 | humidity | 60 | 43200 | > th | dose independent | rect. | 22 | 23 |
| 221 | 52.09 | humidity | 70 | 43200 | < th | dose dependent | rect. | 9 | 11 |
| 245 | 52.11 | humidity | 60 | 43200 | < th | dose independent | no | NA | NA |
| 271 | 52.12 | humidity | 60 | 43200 | < th | dose independent | rect. | 21 | 23 |
| 284 | 52.13 | humidity | 60 | 43200 | > th | dose independent | rect. | 22 | 17 |
| 298 | 52.13 | humidity | 60 | 43200 | < th | dose independent | rect. | 10 | 23 |
| 312 | 52.13 | temperature | 15 | 720 | > th | dose dependent | rect. | 11 | 19 |
| 331 | 52.14 | humidity | 60 | 43200 | > th | dose independent | rect. | 10 | 23 |
| 366 | 52.15 | humidity | 70 | 43200 | < th | dose dependent | sin | 20 | NA |
| 378 | 52.16 | humidity | 60 | 43200 | < th | dose independent | sin | 15 | NA |
| 397 | 52.16 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 21 |
| 510 | 52.20 | humidity | 50 | 43200 | < th | dose dependent | no | NA | NA |
| 665 | 52.25 | humidity | 70 | 43200 | < th | dose dependent | rect. | 11 | 5 |
| 680 | 52.26 | humidity | 60 | 43200 | > th | dose independent | sin | 15 | NA |
| 724 | 52.28 | humidity | 70 | 43200 | < th | dose dependent | rect. | 12 | 3 |
| 777 | 52.32 | humidity | 60 | 43200 | < th | dose independent | sin | 3 | NA |
| 859 | 52.38 | humidity | 50 | 43200 | < th | dose independent | rect. | 20 | 17 |
| 861 | 52.38 | humidity | 50 | 43200 | < th | dose independent | rect. | 18 | 19 |
| 884 | 52.40 | humidity | 50 | 43200 | < th | dose independent | rect. | 4 | 9 |
| 933 | 52.42 | radiation | 10 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 975 | 52.44 | humidity | 60 | 43200 | > th | dose independent | rect. | 15 | 15 |