Os03g0850800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0850800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.2 | 0.339 | 10.2 | -0.73 | 1.43 | 2.04 | 0.488 | 1.15 | -0.353 | 5.56 | 20.42 | 526 | -- | -- |
| 54.03 | 0.342 | 10.2 | -0.843 | 1.45 | 2.08 | 0.595 | -- | -0.367 | 5.4 | 20.43 | 496 | -- | -- |
| 52.6 | 0.338 | 10.2 | -0.797 | 1.44 | 2.02 | -- | 0.731 | -0.371 | 5.54 | 20.7 | 530 | -- | -- |
| 52.87 | 0.339 | 10.2 | -0.957 | 1.46 | 2.08 | -- | -- | -0.416 | 5.59 | 21.03 | 530 | -- | -- |
| 72.32 | 0.396 | 10.2 | -0.705 | -- | 1.57 | -- | 0.912 | -0.309 | -- | 21.8 | 1246 | -- | -- |
| 134.91 | 0.545 | 10.1 | -0.456 | 0.743 | -- | -0.327 | -- | -0.0495 | 4.39 | -- | -- | -- | -- |
| 135.2 | 0.545 | 10.1 | -0.453 | 0.74 | -- | -- | -- | -0.0478 | 4.37 | -- | -- | -- | -- |
| 72.29 | 0.396 | 10.2 | -0.978 | -- | 1.64 | -- | -- | -0.382 | -- | 22.12 | 1246 | -- | -- |
| 74.68 | 0.402 | 10.2 | -- | 1.39 | 1.79 | -- | -- | -0.261 | 5.35 | 21.89 | 490 | -- | -- |
| 164.64 | 0.6 | 10.2 | -0.424 | -- | -- | -- | -- | -0.0282 | -- | -- | -- | -- | -- |
| 140.62 | 0.555 | 10.1 | -- | 0.732 | -- | -- | -- | 0.00269 | 4.38 | -- | -- | -- | -- |
| 95.39 | 0.455 | 10.2 | -- | -- | 1.4 | -- | -- | -0.227 | -- | 22.35 | 1233 | -- | -- |
| 169.38 | 0.607 | 10.1 | -- | -- | -- | -- | -- | 0.0189 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 52.86 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 2 | 52.95 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 3 | 52.96 | temperature | 20 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 4 | 53.19 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 5 | 53.21 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 6 | 53.28 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 7 | 53.30 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 8 | 53.38 | temperature | 20 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 9 | 53.43 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 25 | 53.95 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 63 | 54.98 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 104 | 55.71 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 18 |
| 252 | 56.55 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 274 | 56.67 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 6 |
| 330 | 56.97 | temperature | 20 | 1440 | > th | dose dependent | sin | 18 | NA |
| 335 | 56.99 | temperature | 20 | 1440 | > th | dose dependent | sin | 4 | NA |
| 365 | 57.14 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 818 | 58.30 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 2 |