Os03g0845300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hyaluronan/mRNA binding protein family protein.
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Os03g0845300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hyaluronan/mRNA binding protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 138.39 | 0.553 | 4.09 | -0.661 | 0.24 | 2.23 | 0.113 | 1.92 | -0.258 | 6.3 | 24.12 | 990 | -- | -- |
| 142.65 | 0.556 | 4.06 | -0.366 | 0.249 | 1.94 | 0.142 | -- | -0.207 | 6.35 | 24.9 | 1024 | -- | -- |
| 138.41 | 0.548 | 4.1 | -0.662 | 0.243 | 2.25 | -- | 1.96 | -0.261 | 6.36 | 24.03 | 998 | -- | -- |
| 142.65 | 0.556 | 4.05 | -0.352 | 0.252 | 1.97 | -- | -- | -0.181 | 6.38 | 24.8 | 1020 | -- | -- |
| 140.81 | 0.553 | 4.1 | -0.673 | -- | 2.25 | -- | 1.99 | -0.264 | -- | 24 | 847 | -- | -- |
| 198.16 | 0.66 | 4.14 | -0.935 | 0.356 | -- | 0.262 | -- | -0.589 | 9.09 | -- | -- | -- | -- |
| 198.4 | 0.66 | 4.14 | -0.925 | 0.355 | -- | -- | -- | -0.589 | 9.11 | -- | -- | -- | -- |
| 145.47 | 0.562 | 4.06 | -0.356 | -- | 1.97 | -- | -- | -0.18 | -- | 24.78 | 887 | -- | -- |
| 145.42 | 0.562 | 4.04 | -- | 0.261 | 2.11 | -- | -- | -0.122 | 6.51 | 24.78 | 1047 | -- | -- |
| 205.67 | 0.67 | 4.15 | -0.926 | -- | -- | -- | -- | -0.587 | -- | -- | -- | -- | -- |
| 220.97 | 0.695 | 4.12 | -- | 0.355 | -- | -- | -- | -0.486 | 9.31 | -- | -- | -- | -- |
| 148.32 | 0.567 | 4.04 | -- | -- | 2.13 | -- | -- | -0.113 | -- | 24.73 | 928 | -- | -- |
| 228.3 | 0.705 | 4.13 | -- | -- | -- | -- | -- | -0.484 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 134.67 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 13 |
| 2 | 134.97 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 11 |
| 11 | 135.46 | temperature | 25 | 720 | < th | dose dependent | sin | 7 | NA |
| 57 | 137.33 | temperature | 15 | 720 | > th | dose dependent | sin | 8 | NA |
| 98 | 138.66 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 100 | 138.70 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 104 | 138.88 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 106 | 138.89 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 5 |
| 163 | 139.77 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 7 |
| 220 | 140.67 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 4 |
| 355 | 141.91 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 5 |
| 384 | 142.15 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 432 | 142.45 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 445 | 142.53 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 633 | 143.38 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 683 | 143.66 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 15 | 6 |
| 690 | 143.69 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 12 | 9 |
| 726 | 143.82 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 14 | 8 |
| 732 | 143.85 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 798 | 144.22 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 847 | 144.43 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 858 | 144.48 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 13 | 4 |
| 874 | 144.54 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 12 | 5 |
| 881 | 144.56 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 13 | 3 |
| 889 | 144.58 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 10 | 18 |
| 908 | 144.65 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 909 | 144.65 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 20 | 6 |
| 963 | 144.78 | atmosphere | 1015 | 43200 | > th | dose dependent | sin | 14 | NA |