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Os03g0839100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Ubiquinone biosynthesis monooxygenase, COQ6-type family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.6 (0.0151) R2 : 0.132
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.265 (0.0318) R2dN8 : 0.171 R2N8 : 0.132
σ : 0.284
deviance : 37.03
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
26.85 0.243 10.6 -0.0166 0.48 0.442 0.148 -0.341 -0.221 6.57 58 581 -- --
26.93 0.242 10.6 -0.0136 0.479 0.427 0.215 -- -0.221 6.54 57.93 573 -- --
26.89 0.242 10.6 -0.0144 0.477 0.438 -- -0.413 -0.222 6.54 58 573 -- --
27.01 0.242 10.6 -0.0107 0.474 0.389 -- -- -0.228 6.51 57.64 573 -- --
34.6 0.274 10.6 -0.0147 -- 0.285 -- -0.167 -0.203 -- 58.83 1233 -- --
30.14 0.257 10.6 0.0395 0.362 -- -0.121 -- -0.267 6.41 -- -- -- --
30.17 0.257 10.6 0.0381 0.362 -- -- -- -0.267 6.46 -- -- -- --
34.64 0.274 10.6 -0.0175 -- 0.268 -- -- -0.206 -- 58 1224 -- --
27 0.242 10.6 -- 0.478 0.39 -- -- -0.226 6.52 57.37 581 -- --
36.97 0.284 10.6 0.0473 -- -- -- -- -0.259 -- -- -- -- --
30.21 0.257 10.6 -- 0.362 -- -- -- -0.271 6.45 -- -- -- --
34.51 0.274 10.6 -- -- 0.297 -- -- -0.197 -- 54 2660 -- --
37.03 0.284 10.6 -- -- -- -- -- -0.265 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 26.61 humidity 60.0 720 > th dose independent rect. 1 18
2 26.64 humidity 60.0 720 > th dose independent rect. 7 12
3 26.65 humidity 60.0 720 > th dose independent rect. 16 21
4 26.75 humidity 60.0 720 > th dose independent rect. 7 16
5 26.75 humidity 60.0 720 > th dose independent rect. 21 22
10 26.80 wind 9.0 14400 > th dose dependent rect. 18 19
11 26.81 humidity 60.0 720 > th dose independent rect. 1 22
13 26.83 humidity 60.0 720 > th dose independent rect. 7 21
14 26.85 humidity 60.0 720 > th dose independent rect. 11 8
21 26.88 humidity 50.0 720 > th dose dependent rect. 7 12
23 26.89 humidity 70.0 720 < th dose dependent sin 0 NA
24 26.89 humidity 90.0 43200 < th dose dependent rect. 5 1
25 26.89 humidity 70.0 720 < th dose dependent rect. 8 10
26 26.89 wind 1.0 14400 > th dose dependent rect. 18 19
40 26.90 wind 1.0 14400 > th dose dependent rect. 20 18
46 26.90 humidity 70.0 720 < th dose dependent rect. 18 23
49 26.91 wind 1.0 14400 > th dose dependent rect. 18 12
70 26.92 wind 9.0 14400 < th dose dependent rect. 17 20
85 26.93 wind 9.0 14400 < th dose dependent rect. 20 18
101 26.94 humidity 70.0 720 < th dose dependent no NA NA
102 26.94 radiation 1.0 43200 < th dose dependent rect. 1 1
196 26.96 wind 9.0 14400 < th dose dependent rect. 18 12
201 26.96 humidity 70.0 720 < th dose dependent rect. 11 23
202 26.96 humidity 70.0 720 < th dose dependent rect. 15 23
205 26.97 humidity 60.0 720 > th dose independent rect. 11 17
206 26.97 wind 9.0 14400 < th dose independent rect. 18 19
215 26.98 wind 7.0 14400 < th dose independent rect. 15 22
223 26.99 temperature 25.0 10 > th dose dependent rect. 18 2
245 27.00 wind 7.0 14400 > th dose independent rect. 15 22
252 27.00 humidity 70.0 720 < th dose dependent rect. 13 23
261 27.01 wind 1.0 14400 > th dose dependent rect. 24 14
262 27.01 wind 9.0 14400 < th dose dependent rect. 24 14
285 27.04 wind 9.0 14400 > th dose independent rect. 17 20
288 27.04 humidity 50.0 720 > th dose dependent rect. 11 8
305 27.05 humidity 60.0 720 > th dose independent sin 0 NA
306 27.05 wind 3.0 14400 < th dose independent rect. 24 1
319 27.06 humidity 60.0 720 < th dose independent sin 1 NA
346 27.07 humidity 50.0 720 > th dose dependent rect. 11 2
354 27.08 humidity 60.0 720 < th dose independent rect. 8 10
362 27.08 wind 9.0 14400 > th dose independent rect. 18 18
369 27.08 humidity 70.0 720 < th dose dependent rect. 11 4
373 27.08 wind 7.0 14400 < th dose dependent rect. 2 12
391 27.09 wind 3.0 14400 < th dose independent rect. 20 9
392 27.09 wind 3.0 14400 < th dose independent rect. 18 11
409 27.09 humidity 60.0 720 > th dose independent rect. 11 23
411 27.09 wind 1.0 14400 > th dose dependent sin 11 NA
434 27.10 wind 1.0 14400 > th dose dependent rect. 2 12
449 27.11 humidity 60.0 720 < th dose independent no NA NA
452 27.11 humidity 60.0 720 > th dose independent rect. 11 12
528 27.11 humidity 60.0 720 < th dose independent rect. 15 23
529 27.11 humidity 60.0 720 < th dose independent rect. 17 23
556 27.12 humidity 60.0 720 > th dose independent sin 21 NA
558 27.12 humidity 60.0 720 > th dose independent no NA NA
560 27.12 humidity 60.0 720 > th dose independent rect. 11 2
578 27.12 wind 1.0 14400 > th dose dependent sin 5 NA
580 27.12 wind 5.0 14400 < th dose dependent rect. 24 1
590 27.13 wind 3.0 14400 > th dose independent rect. 24 1
613 27.13 wind 9.0 14400 < th dose dependent sin 5 NA
633 27.14 temperature 25.0 10 > th dose independent rect. 18 2
643 27.14 wind 9.0 14400 < th dose dependent sin 11 NA
650 27.14 humidity 50.0 720 > th dose dependent rect. 7 16
656 27.15 wind 3.0 14400 > th dose independent rect. 20 9
660 27.15 precipitation 0.1 720 < th dose independent rect. 19 16
674 27.15 precipitation 0.1 720 < th dose dependent rect. 19 16
681 27.16 wind 3.0 14400 > th dose independent rect. 18 12
711 27.17 humidity 80.0 43200 > th dose independent rect. 20 10
757 27.17 humidity 50.0 720 > th dose dependent rect. 1 18
779 27.18 wind 1.0 14400 > th dose dependent rect. 24 1
800 27.19 humidity 70.0 30 > th dose independent rect. 11 17
889 27.21 wind 3.0 14400 < th dose independent rect. 21 1
895 27.21 wind 7.0 14400 < th dose independent rect. 7 21
924 27.22 wind 7.0 14400 < th dose independent rect. 7 19
929 27.22 wind 7.0 14400 < th dose independent rect. 24 21
931 27.22 wind 7.0 14400 < th dose independent rect. 10 23
951 27.23 wind 7.0 14400 < th dose independent rect. 6 17
954 27.23 wind 7.0 14400 < th dose independent rect. 10 18
970 27.23 wind 1.0 43200 < th dose dependent rect. 8 5
991 27.24 humidity 60.0 720 > th dose independent rect. 7 8
992 27.24 wind 7.0 14400 < th dose independent rect. 6 15