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Os03g0832900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to DNAJ-like protein (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12 (0.0109) R2 : 0.827
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.29 (0.0276) R2dC : 0.826 R2C : 0.826
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0186 (0.023) R2dN8 : 0.000321 R2N8 : 0.00067
σ : 0.206
deviance : 19.4
__
_____
C
peak time of C : 15.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
14.98 0.182 12 -0.101 1.02 -0.373 -0.0829 0.391 -0.0349 16.6 9.19 120 -- --
15.35 0.182 12.1 -0.128 0.959 -0.42 -0.348 -- -0.0478 16.6 8.249 156 -- --
14.79 0.179 12 -0.107 0.97 -0.422 -- 0.423 -0.0379 16.7 8.15 140 -- --
15.65 0.184 12 -0.12 0.95 -0.427 -- -- -0.0421 16.7 8.21 156 -- --
31.56 0.262 12 0.242 -- -0.998 -- -0.265 0.022 -- 3.778 416 -- --
18.42 0.201 12 -0.127 1.29 -- -0.41 -- -0.0312 15.6 -- -- -- --
18.93 0.204 12 -0.134 1.28 -- -- -- -0.0335 15.6 -- -- -- --
21.91 0.218 12 -0.203 -- -1.22 -- -- -0.0924 -- 1.35 476 -- --
16.04 0.187 12 -- 0.951 -0.429 -- -- -0.0266 16.7 8.21 163 -- --
110.73 0.492 12 -0.188 -- -- -- -- -0.0676 -- -- -- -- --
19.4 0.206 12 -- 1.29 -- -- -- -0.0186 15.6 -- -- -- --
22.87 0.223 12 -- -- -1.2 -- -- -0.0835 -- 1.57 467 -- --
111.66 0.493 12 -- -- -- -- -- -0.0468 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 12.14 radiation 40.0 270 < th dose dependent rect. 13 7
3 12.27 radiation 20.0 270 < th dose independent rect. 15 15
4 12.27 radiation 30.0 270 < th dose dependent rect. 15 16
6 12.33 radiation 20.0 270 < th dose independent rect. 13 7
14 12.51 temperature 15.0 270 > th dose independent rect. 1 20
17 12.54 radiation 20.0 270 < th dose dependent rect. 15 4
30 12.70 temperature 15.0 270 > th dose independent rect. 2 18
54 12.85 radiation 10.0 270 < th dose dependent rect. 17 1
56 12.85 radiation 10.0 30 < th dose dependent rect. 5 18
62 12.90 radiation 10.0 270 < th dose dependent rect. 2 18
82 13.00 radiation 10.0 30 < th dose independent rect. 5 18
87 13.04 radiation 10.0 270 < th dose independent rect. 1 19
101 13.09 humidity 50.0 270 > th dose independent rect. 2 18
104 13.11 temperature 30.0 270 < th dose independent rect. 15 5
105 13.11 humidity 50.0 270 > th dose independent rect. 15 5
116 13.16 temperature 30.0 270 < th dose independent rect. 17 1
117 13.17 temperature 15.0 270 > th dose independent rect. 1 10
118 13.18 temperature 30.0 30 < th dose independent rect. 17 6
124 13.18 temperature 10.0 270 > th dose dependent rect. 1 8
129 13.20 wind 7.0 270 < th dose independent rect. 21 4
132 13.20 atmosphere 1015.0 270 < th dose independent rect. 1 20
134 13.21 precipitation 0.1 270 < th dose independent rect. 21 4
135 13.21 precipitation 0.1 270 < th dose dependent rect. 21 4
140 13.23 temperature 10.0 270 > th dose independent rect. 21 4
141 13.23 temperature 30.0 270 < th dose independent rect. 21 4
142 13.23 humidity 50.0 270 > th dose independent rect. 21 4
145 13.23 atmosphere 995.0 270 > th dose independent rect. 21 4
146 13.23 radiation 1.0 270 < th dose independent rect. 21 4
152 13.23 radiation 1.0 270 < th dose dependent rect. 21 4
167 13.28 wind 7.0 270 < th dose independent rect. 20 6
173 13.29 atmosphere 995.0 270 > th dose independent rect. 2 18
178 13.30 temperature 10.0 270 > th dose independent rect. 20 6
179 13.30 temperature 30.0 270 < th dose independent rect. 20 6
180 13.30 humidity 50.0 270 > th dose independent rect. 20 6
183 13.30 atmosphere 995.0 270 > th dose independent rect. 20 6
184 13.30 radiation 1.0 270 < th dose independent rect. 20 6
189 13.30 precipitation 0.1 270 < th dose independent rect. 20 6
191 13.30 atmosphere 1015.0 270 < th dose independent rect. 2 18
192 13.30 atmosphere 995.0 270 > th dose independent rect. 1 20
193 13.30 humidity 50.0 270 > th dose dependent rect. 17 2
195 13.30 radiation 1.0 270 < th dose dependent rect. 20 6
200 13.30 precipitation 0.1 270 < th dose dependent rect. 20 6
209 13.32 humidity 50.0 270 > th dose independent rect. 1 20
217 13.33 humidity 50.0 270 > th dose independent rect. 16 14
237 13.37 humidity 70.0 10 > th dose independent rect. 17 6
239 13.37 humidity 50.0 90 > th dose dependent rect. 17 4
240 13.37 humidity 50.0 10 > th dose dependent rect. 17 6
256 13.40 humidity 50.0 270 > th dose dependent rect. 15 5
259 13.41 humidity 70.0 270 > th dose independent rect. 17 1
270 13.43 wind 9.0 270 < th dose dependent rect. 21 4
285 13.46 precipitation 0.1 270 < th dose independent rect. 11 14
288 13.46 precipitation 0.1 270 < th dose dependent rect. 11 14
345 13.53 wind 9.0 270 < th dose independent rect. 1 20
371 13.56 wind 9.0 270 < th dose independent rect. 2 18
374 13.56 radiation 10.0 30 < th dose dependent rect. 10 13
379 13.57 humidity 50.0 270 > th dose dependent rect. 21 4
390 13.58 radiation 10.0 30 < th dose dependent rect. 8 15
398 13.60 temperature 20.0 270 > th dose independent rect. 2 7
399 13.60 wind 9.0 270 < th dose independent rect. 11 14
423 13.63 wind 1.0 270 > th dose independent rect. 21 4
431 13.65 atmosphere 1010.0 270 < th dose independent rect. 15 5
448 13.67 temperature 15.0 270 > th dose independent rect. 15 5
455 13.68 atmosphere 995.0 270 > th dose independent rect. 15 5
458 13.68 temperature 30.0 90 < th dose independent rect. 17 14
460 13.68 wind 9.0 270 < th dose dependent rect. 20 6
465 13.69 radiation 1.0 10 < th dose independent rect. 15 8
466 13.69 humidity 70.0 30 > th dose independent rect. 14 9
478 13.70 temperature 10.0 270 > th dose independent rect. 6 10
479 13.70 atmosphere 1015.0 270 < th dose independent rect. 6 10
480 13.70 temperature 10.0 270 > th dose independent rect. 16 14
505 13.71 wind 9.0 270 < th dose independent rect. 6 10
526 13.72 atmosphere 995.0 270 > th dose independent rect. 16 14
527 13.72 precipitation 0.1 270 < th dose independent rect. 2 18
528 13.72 humidity 50.0 270 > th dose independent rect. 20 19
529 13.72 precipitation 0.1 270 < th dose independent rect. 1 20
536 13.72 precipitation 0.1 270 < th dose dependent rect. 2 18
537 13.72 precipitation 0.1 270 < th dose dependent rect. 1 20
547 13.73 temperature 10.0 270 > th dose independent rect. 20 19
560 13.74 precipitation 0.1 270 < th dose independent rect. 20 19
567 13.74 precipitation 0.1 270 < th dose dependent rect. 20 19
574 13.75 precipitation 0.1 270 < th dose independent rect. 6 10
586 13.75 precipitation 0.1 270 < th dose dependent rect. 6 10
621 13.77 humidity 70.0 270 > th dose independent rect. 1 8
625 13.77 wind 9.0 270 < th dose independent rect. 20 19
626 13.77 atmosphere 995.0 270 > th dose independent rect. 20 19
637 13.78 atmosphere 1010.0 90 < th dose independent rect. 4 18
645 13.79 wind 1.0 270 > th dose independent rect. 20 6
646 13.79 atmosphere 995.0 30 > th dose independent rect. 17 6
661 13.81 humidity 50.0 270 > th dose independent rect. 1 10
668 13.81 radiation 10.0 90 < th dose dependent sin 22 NA
670 13.81 atmosphere 995.0 10 > th dose dependent rect. 17 6
687 13.83 wind 5.0 270 < th dose independent rect. 23 1
689 13.83 precipitation 0.1 270 < th dose independent rect. 23 1
694 13.83 precipitation 0.1 270 < th dose dependent rect. 23 1
698 13.84 temperature 10.0 270 > th dose independent rect. 23 1
699 13.84 temperature 30.0 270 < th dose independent rect. 23 1
700 13.84 humidity 50.0 270 > th dose independent rect. 23 1
703 13.84 atmosphere 995.0 270 > th dose independent rect. 23 1
704 13.84 radiation 1.0 270 < th dose independent rect. 23 1
726 13.84 temperature 30.0 270 < th dose independent rect. 1 19
729 13.84 radiation 1.0 270 < th dose dependent rect. 23 1
747 13.85 wind 1.0 270 > th dose independent rect. 15 5
758 13.86 wind 7.0 270 < th dose independent rect. 1 10
759 13.86 atmosphere 995.0 30 > th dose independent rect. 23 18
783 13.87 precipitation 0.1 270 < th dose independent rect. 18 23
794 13.87 precipitation 0.1 270 < th dose dependent rect. 18 23
795 13.88 temperature 10.0 30 > th dose independent rect. 17 6
798 13.88 atmosphere 1010.0 30 < th dose independent rect. 17 6
807 13.88 temperature 10.0 30 > th dose independent rect. 23 18
809 13.88 precipitation 0.1 30 < th dose independent rect. 23 18
813 13.88 precipitation 0.1 30 < th dose dependent rect. 23 18
818 13.89 atmosphere 1010.0 270 < th dose independent rect. 1 8
824 13.89 atmosphere 995.0 270 > th dose independent rect. 1 9
826 13.89 temperature 10.0 270 > th dose independent rect. 10 15
827 13.89 temperature 10.0 270 > th dose independent rect. 21 17
830 13.89 atmosphere 995.0 270 > th dose independent rect. 21 17
841 13.90 precipitation 0.1 270 < th dose independent rect. 21 17
843 13.90 humidity 50.0 270 > th dose dependent rect. 20 6
849 13.90 precipitation 0.1 270 < th dose dependent rect. 21 17
851 13.90 humidity 50.0 270 > th dose dependent rect. 1 19
879 13.92 temperature 10.0 1440 > th dose independent rect. 18 6
882 13.92 humidity 50.0 1440 > th dose independent rect. 18 6
885 13.92 radiation 20.0 1440 < th dose independent rect. 18 6
899 13.92 temperature 10.0 1440 > th dose independent rect. 24 18
925 13.93 wind 9.0 270 < th dose independent rect. 21 17
928 13.93 wind 1.0 270 > th dose independent rect. 20 19
996 13.95 precipitation 0.1 270 < th dose independent rect. 1 9