Os03g0831700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0831700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 292.57 | 0.804 | 6.55 | -5.02 | 1.48 | 1.68 | 1.95 | -4.63 | -0.701 | 4 | 26.88 | 1282 | -- | -- |
| 298.83 | 0.805 | 6.39 | -3.93 | 1.5 | 1.28 | 2.35 | -- | -0.432 | 3.92 | 26.6 | 1254 | -- | -- |
| 303.23 | 0.811 | 6.54 | -4.94 | 1.48 | 1.68 | -- | -4.28 | -0.673 | 3.97 | 27.09 | 1283 | -- | -- |
| 306.37 | 0.815 | 6.41 | -3.94 | 1.5 | 1.21 | -- | -- | -0.493 | 3.97 | 27.02 | 1268 | -- | -- |
| 418.85 | 0.953 | 6.54 | -4.99 | -- | 1.95 | -- | -3.92 | -0.801 | -- | 25.4 | 1241 | -- | -- |
| 356.57 | 0.885 | 6.42 | -3.54 | 1.62 | -- | 2.09 | -- | -0.477 | 3.73 | -- | -- | -- | -- |
| 369.65 | 0.9 | 6.42 | -3.58 | 1.63 | -- | -- | -- | -0.489 | 3.68 | -- | -- | -- | -- |
| 419.48 | 0.954 | 6.46 | -4.03 | -- | 1.64 | -- | -- | -0.643 | -- | 24.77 | 1229 | -- | -- |
| 689.29 | 1.22 | 6.31 | -- | 1.5 | 0.636 | -- | -- | 0.0164 | 3.85 | 33.77 | 1019 | -- | -- |
| 517.71 | 1.06 | 6.43 | -3.51 | -- | -- | -- | -- | -0.445 | -- | -- | -- | -- | -- |
| 706.7 | 1.24 | 6.33 | -- | 1.56 | -- | -- | -- | -0.0907 | 3.7 | -- | -- | -- | -- |
| 773.64 | 1.3 | 6.31 | -- | -- | -1.66 | -- | -- | 0.0528 | -- | 24.77 | 1229 | -- | -- |
| 842.3 | 1.35 | 6.34 | -- | -- | -- | -- | -- | -0.0563 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 287.33 | radiation | 20 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 3 | 288.15 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 13 |
| 5 | 288.60 | wind | 5 | 43200 | < th | dose independent | rect. | 23 | 18 |
| 10 | 288.82 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 11 | 288.88 | wind | 5 | 43200 | > th | dose independent | rect. | 23 | 18 |
| 17 | 289.06 | wind | 5 | 43200 | > th | dose independent | rect. | 2 | 15 |
| 28 | 289.29 | wind | 5 | 43200 | < th | dose independent | rect. | 19 | 22 |
| 34 | 289.38 | wind | 5 | 43200 | > th | dose independent | rect. | 18 | 23 |
| 49 | 289.67 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 55 | 289.75 | wind | 5 | 43200 | > th | dose independent | rect. | 6 | 10 |
| 56 | 289.76 | wind | 5 | 43200 | < th | dose independent | rect. | 6 | 10 |
| 57 | 289.77 | wind | 5 | 43200 | > th | dose dependent | rect. | 18 | 23 |
| 67 | 289.93 | wind | 5 | 43200 | > th | dose independent | rect. | 23 | 22 |
| 82 | 290.07 | wind | 5 | 43200 | > th | dose independent | sin | 1 | NA |
| 83 | 290.08 | wind | 5 | 43200 | > th | dose independent | no | NA | NA |
| 84 | 290.09 | wind | 5 | 43200 | < th | dose independent | sin | 2 | NA |
| 88 | 290.13 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 89 | 290.13 | wind | 5 | 43200 | < th | dose independent | rect. | 23 | 23 |
| 92 | 290.15 | wind | 5 | 43200 | > th | dose independent | rect. | 2 | 23 |
| 93 | 290.15 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 23 |
| 103 | 290.21 | wind | 5 | 43200 | < th | dose independent | no | NA | NA |
| 107 | 290.23 | wind | 5 | 43200 | > th | dose independent | rect. | 4 | 23 |
| 109 | 290.23 | wind | 5 | 43200 | > th | dose dependent | rect. | 23 | 18 |
| 125 | 290.34 | wind | 5 | 43200 | < th | dose independent | rect. | 2 | 23 |
| 126 | 290.34 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 132 | 290.37 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 23 |
| 137 | 290.38 | wind | 5 | 43200 | > th | dose dependent | rect. | 6 | 10 |
| 139 | 290.40 | wind | 5 | 43200 | > th | dose dependent | rect. | 4 | 12 |
| 142 | 290.43 | wind | 5 | 43200 | < th | dose independent | rect. | 4 | 23 |
| 148 | 290.47 | wind | 5 | 43200 | < th | dose independent | rect. | 7 | 23 |
| 164 | 290.54 | wind | 5 | 43200 | > th | dose dependent | rect. | 23 | 23 |
| 177 | 290.59 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 23 |
| 185 | 290.67 | wind | 5 | 43200 | > th | dose dependent | no | NA | NA |
| 187 | 290.67 | wind | 5 | 43200 | > th | dose dependent | rect. | 2 | 23 |
| 197 | 290.70 | wind | 5 | 43200 | > th | dose dependent | rect. | 4 | 23 |
| 201 | 290.73 | wind | 5 | 43200 | > th | dose dependent | sin | 2 | NA |
| 209 | 290.77 | wind | 5 | 43200 | > th | dose dependent | rect. | 6 | 23 |
| 259 | 290.99 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 23 |
| 686 | 293.72 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 7 |
| 715 | 293.83 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 725 | 293.86 | radiation | 1 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 772 | 294.09 | temperature | 30 | 1440 | < th | dose independent | sin | 14 | NA |
| 790 | 294.20 | temperature | 30 | 1440 | > th | dose independent | sin | 13 | NA |
| 816 | 294.34 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 4 |
| 868 | 294.50 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 13 |
| 870 | 294.51 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 6 |
| 875 | 294.53 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 4 |
| 879 | 294.55 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 16 |
| 898 | 294.64 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 10 |
| 932 | 294.75 | wind | 1 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 934 | 294.76 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 18 |
| 963 | 294.93 | wind | 5 | 43200 | > th | dose independent | sin | 13 | NA |
| 991 | 295.04 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 10 |