BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0831700 Os03g0831700|AK066131
(886 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G26910.1 | chr5:9466169-9469523 REVERSE LENGTH=854 92 1e-18
AT3G58650.1 | chr3:21696349-21699219 REVERSE LENGTH=821 92 1e-18
AT3G05750.1 | chr3:1704677-1707546 FORWARD LENGTH=802 72 2e-12
>AT5G26910.1 | chr5:9466169-9469523 REVERSE LENGTH=854
Length = 853
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 90/165 (54%), Gaps = 15/165 (9%)
Query: 719 EIDFIREILNTSPLNGQICSGLERFINSDILDLQLLEDLNGDIRLAVGVAEGKTLRMNRR 778
E ++I EIL + L + + +D+L L +++ G R V A ++ R+
Sbjct: 673 EFEYISEILGSDQL---MVKEYALGMATDVLPASLFDEMEG--RGEVTAA-----KIKRK 722
Query: 779 LLFECVNEILSVRCAYYFNAGYGSWFLGMAIL----KKLTAEEIYAEMTDLKVAEEWMVD 834
LF+ VN+ L++RC F G LG + AEE+ E+ LK E M+D
Sbjct: 723 TLFDFVNKCLALRCEQMF-MGSCRGLLGKGGFLFEQRDWLAEELNREIHGLKKMREMMMD 781
Query: 835 ELVYKEMSSPLGSWVDFKLESYESGIDITTELLGSLIDEMVADLL 879
ELV KEMSS G W+DF+ E+YE GIDI E++ +L+D++V DL+
Sbjct: 782 ELVDKEMSSFEGRWLDFERETYEEGIDIEGEIVSTLVDDLVNDLV 826
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 3 VEKPTSKGHGFFSLFDWGKKSKKRLVSGNGSDSPAPRVSENFRESDGGTPSTRPNSFLED 62
VE+ S+G GF +LFDW KS+K+L SG+ S+ +SE ++ +R + D
Sbjct: 4 VERKRSRG-GFLNLFDWHGKSRKKLFSGSTSE-----LSEESKQPAQNLLKSRVSLIEVD 57
Query: 63 -----APXXXXXXXXXXXXXVVDDEALVRRGPTVVARLMGLDSMPAASSSGSYTMPLT-- 115
+ V D+ R P+VVARLMGL+S+P + P
Sbjct: 58 EIGKSSSNNQRSDSSCCASSVTSDDGQGTRAPSVVARLMGLESLPVPNVQEPRLNPDLDP 117
Query: 116 -VQQSPQNSTIHDEFIGRSYVG--------SPHKMPGSPHKMPGSPIDRFRMEALPPRFA 166
+ + QN+ D + YV S + + PI+RF+ E PPR A
Sbjct: 118 FLLRPSQNTNRWDAYENLGYVNLRSDYDGISWDHLDSRTNNGRNQPIERFQSETFPPRSA 177
Query: 167 KRTLSVAQNKLSPMKNPNHISSRNAADIMEAASRII 202
K LSP+++P + SRN +MEAASR+I
Sbjct: 178 KPICVTNNRHLSPIRSPGFVPSRNPIYVMEAASRMI 213
>AT3G58650.1 | chr3:21696349-21699219 REVERSE LENGTH=821
Length = 820
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 135/535 (25%), Positives = 214/535 (40%), Gaps = 113/535 (21%)
Query: 3 VEKPTSKGHGFFSLFDWGKKSKKRLVSGNGSD--SPAPRVSENFRESDGGTPSTRPNSFL 60
VE+ +G F +LFDW KS+K+L S N S + + EN + PS P+S
Sbjct: 4 VERKRPRG-AFLNLFDWHGKSRKKLFSSNLSQLSEESKQAKENVQ-----NPSITPHSVF 57
Query: 61 E------DAPXXXXXXXXXXXXXVVDDEALVRRGPTVVARLMGLDSMPAAS--------S 106
E + V D+ V R +VVARLMGL+ +P +
Sbjct: 58 EVDQSVKNPTYNPRSDSSCCASSVTSDDGNVVRA-SVVARLMGLEGLPLPNVLEPRVNPD 116
Query: 107 SGSYTMPLTVQQSPQNSTI--HDEFIGRSYVGSPHKMPGSPHKMPGSPIDRFRMEALPPR 164
Y + + Q + ++ + +F G S+ + P K I+RF+ E LPPR
Sbjct: 117 LDPYFLRSSRQANTWDANVDRQSDFDGVSWDHLDSRTSKGPRK---RMIERFQTETLPPR 173
Query: 165 FAKRTLSVAQNK-LSPMKNPNHISSRNAADIMEAASRIIGAGVEVIS------------- 210
AK +SV NK LSP++NP + SRN A +MEAASR+I +I+
Sbjct: 174 SAK-PISVTHNKLLSPIRNPGFVPSRNPAYVMEAASRMIEQSPRMIARTRMVSSSDSSSP 232
Query: 211 -PYRVRDVGYANTVRVYSQREIAIVQQRPPRMNEALKKHDGLTSYRLPTGKPLDGSLKSS 269
P R+RD+ + + ++ Q N + D GK +LK
Sbjct: 233 VPLRIRDL--KEKLEAAQKASTSVPQISNDTRNSRYLRGDQNEKKTTVLGKNSYDALKGG 290
Query: 270 GNTSASVVSQSNGGAPVGPKVKASSRSSPDSRATNVQGREDISKISRKLATRDPERRMVE 329
S +Q+ K SS DS + + G ++++++ E+ +
Sbjct: 291 EVKPPSFAAQA----------KVSSNQKQDSLSMSSSG-------NKRMSSGQKEKVEAK 333
Query: 330 RNGINQGKNNNQVGMASSSNVLVQNNRKQNAMVKHKVNSKPPTPNRQRSNTHS---INGT 386
+ ++ +++ NVL QNN+KQN R N S +N
Sbjct: 334 NRAVKSQNSSKGSSLSTGKNVLRQNNQKQNC----------------RDNQQSRRVMNKV 377
Query: 387 MRKVGTAGTPSENNTQGNRNVELRSTGHANRRQNSTAKSIPKPGRLPDGRIHSV--KTRP 444
+ KV L +G ++ T S KP LP R S+ +P
Sbjct: 378 VNKV------------------LVESGSISKSSGFTMSSAEKPTSLPLSRKKSLPRSKKP 419
Query: 445 ----------SDKDIADRSQRRVRHNIVIDEQSPFSMNKKKISTDIVSFTFTAPV 489
DK I R ++ ++ NI ID S S + +K D++SFTF++ +
Sbjct: 420 RNGVQESGIYEDKRIK-RGEKSIKCNISIDGDSSTSKDDQKRDMDVISFTFSSSI 473
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 90/168 (53%), Gaps = 12/168 (7%)
Query: 719 EIDFIREILNTSPLNGQ-ICSGLERFINSDILDLQLLEDLNGDIRLAVGVAEGKTLRMNR 777
E+++I EILN+ L Q SG N +L L +++ + G A +++ R
Sbjct: 654 ELEYITEILNSGQLMFQDFASGTT--TNESLLPSSLFDEMER----SRGAA--TSMKTER 705
Query: 778 RLLFECVNEILSVRCAYYFNAGYGSWFLGMAIL---KKLTAEEIYAEMTDLKVAEEWMVD 834
+ LF+CVN+ L+V+ + IL + L AEE+ E+ LK E M+D
Sbjct: 706 KALFDCVNQCLAVKFERMLIGSCKGMMMSGGILLEHRDLLAEEVNREVKGLKKMREMMID 765
Query: 835 ELVYKEMSSPLGSWVDFKLESYESGIDITTELLGSLIDEMVADLLLVS 882
ELV +MS G W+ ++ E +E GID+ E++ +L+D++V+D+L S
Sbjct: 766 ELVDHDMSCFEGRWIGYEREMFEEGIDMEGEIVSALVDDLVSDILSTS 813
>AT3G05750.1 | chr3:1704677-1707546 FORWARD LENGTH=802
Length = 801
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 188/428 (43%), Gaps = 61/428 (14%)
Query: 87 RGPTVVARLMGLDSMPAASSSGSYTMP---LTVQQSPQNSTIHDEFIGRSYVG------- 136
+ P+VVARLMGL+S+P ++ P +S + ++ D + YV
Sbjct: 95 KAPSVVARLMGLESIPVPNALEPRRNPDFDPYFLRSSRKASTWDAYENLGYVNLRSDYDG 154
Query: 137 -SPHKMPGSPHKMPGSPIDRFRMEALPPRFAKRTLSVAQNK-LSPMKNPNHISSRNAADI 194
S + +K PIDRF+ E LPPR AK + V N+ LSP+++P + SRN A +
Sbjct: 155 ISWDHLDSRMNKECNRPIDRFQTETLPPRSAK-PIPVTHNRLLSPIRSPGFVQSRNPASV 213
Query: 195 MEAASRIIGAGVEVISPYRVRDVGYANT----VRVYSQREIAIVQQRPPRMNEALKKHDG 250
ME ASR+I V++ R +++ +R ++ A + + P+++ +G
Sbjct: 214 MEEASRMIEPSPRVVAKTRFSSSDSSSSLPMKIRDLKEKLEASQKGQSPQIS------NG 267
Query: 251 LTSYRLPTGKPLDG--SLKSSGNTSASVVSQSNGGAPVGPKVKASSRSSPDSRATNVQGR 308
+ + GK + +L +++ +S G G KVK S S+ ++A + R
Sbjct: 268 TCNNKCFRGKQDEKRTTLPLKTQERNNLLGESRFGGSKG-KVKPPSVSA-HAKANTIHKR 325
Query: 309 EDISKISRKLATRDPERRMVERNGINQGKNNNQVGMASSS-----NVLVQNNRKQNAMVK 363
D S +S RD ++++ +N I + G+ SS V NN+KQN +
Sbjct: 326 -DSSMLSN--GYRDQKKKVETKNRIVKS------GLKESSASTRKTVDKPNNQKQNQFAE 376
Query: 364 HKVNSKPPTPNRQRSNTHSINGTMRKVG-TAGTPSENNTQGNRNVELRSTGHAN-RRQNS 421
V+++ R R +N + + G T P T ++ + N R
Sbjct: 377 TSVSNQ-----RGRKVMKKVNKVLVENGTTTKKPGFTATSAKKSTSSSLSRKKNLSRSKK 431
Query: 422 TAKSIPKPGRLPDGRIHSVKTRPSDKDIADRSQRRVRHNIVIDEQSPFSMNKKKISTDIV 481
A + + G D RI + ++ ++ NI +D + +K D++
Sbjct: 432 PANGVQEAGVNSDKRIK-------------KGEKVIKCNITVDGGLKTGDDDRKKDMDVI 478
Query: 482 SFTFTAPV 489
SFTF++P+
Sbjct: 479 SFTFSSPI 486
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 91/167 (54%), Gaps = 16/167 (9%)
Query: 719 EIDFIREILNTSPLNGQICSGLERFINSDILDLQLLEDLNGDIRLAVGVAEGKTLRMNRR 778
E+++I EI+ + L + + +DIL L L ++ G R A G ++ R+
Sbjct: 646 ELEYITEIIASGQL---MIKEFSLGMATDILPLSLFDETEGK-RDARG-------KIERK 694
Query: 779 LLFECVNEILSVRCAYYFNAGYGSWFLGMAIL----KKLTAEEIYAEMTDLKVAEEWMVD 834
LF+ VN+ L+++C F G LG + +++ A+++ E LK E M+D
Sbjct: 695 TLFDLVNQWLTLKCEQMF-MGTCKGVLGKQDIFLERREILADQVLKEAQGLKKMREMMMD 753
Query: 835 ELVYKEMSSPLGSWVDFKLESYESGIDITTELLGSLIDEMVADLLLV 881
ELV +MSS G W+D+ E+YE GI+I E++ L+D+++ DL++
Sbjct: 754 ELVDNDMSSCEGKWLDYMRETYEEGIEIEEEIVSELVDDLINDLIMC 800
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.312 0.128 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 18,193,274
Number of extensions: 763306
Number of successful extensions: 1937
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1928
Number of HSP's successfully gapped: 6
Length of query: 886
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 779
Effective length of database: 8,173,057
Effective search space: 6366811403
Effective search space used: 6366811403
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 116 (49.3 bits)