Os03g0821800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 2 domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0821800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Glycosyl transferase, family 2 domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.38 | 0.217 | 10.2 | 0.18 | 0.584 | -0.269 | 0.135 | 1.06 | 0.304 | 23.3 | 12.93 | 1371 | -- | -- |
| 23.32 | 0.225 | 10.2 | 0.0803 | 0.603 | -0.256 | 0.282 | -- | 0.282 | 23.3 | 13.1 | 1351 | -- | -- |
| 21.32 | 0.215 | 10.2 | 0.158 | 0.62 | -0.278 | -- | 1.11 | 0.3 | 23.3 | 13 | 1254 | -- | -- |
| 23.49 | 0.226 | 10.2 | 0.000171 | 0.585 | -0.221 | -- | -- | 0.235 | 23.3 | 16.18 | 1390 | -- | -- |
| 27.59 | 0.246 | 10.2 | 0.0114 | -- | -0.409 | -- | -0.0723 | 0.168 | -- | 10.05 | 1629 | -- | -- |
| 25.03 | 0.235 | 10.2 | -0.0245 | 0.555 | -- | 0.216 | -- | 0.177 | 23.3 | -- | -- | -- | -- |
| 25.23 | 0.235 | 10.2 | -0.0335 | 0.554 | -- | -- | -- | 0.176 | 23.3 | -- | -- | -- | -- |
| 26.24 | 0.239 | 10.2 | -0.072 | -- | -0.429 | -- | -- | 0.23 | -- | 6.693 | 60 | -- | -- |
| 23.48 | 0.226 | 10.2 | -- | 0.586 | -0.216 | -- | -- | 0.237 | 23.4 | 16.17 | 1390 | -- | -- |
| 44.43 | 0.311 | 10.2 | -0.0193 | -- | -- | -- | -- | 0.181 | -- | -- | -- | -- | -- |
| 25.26 | 0.235 | 10.2 | -- | 0.553 | -- | -- | -- | 0.179 | 23.3 | -- | -- | -- | -- |
| 25.96 | 0.237 | 10.2 | -- | -- | -0.402 | -- | -- | 0.211 | -- | 4.47 | 9 | -- | -- |
| 44.44 | 0.311 | 10.2 | -- | -- | -- | -- | -- | 0.183 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.03 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 2 | 20.06 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 8 |
| 5 | 20.17 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 22 | 20.27 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 33 | 20.33 | radiation | 10 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 39 | 20.38 | radiation | 10 | 1440 | < th | dose dependent | sin | 21 | NA |
| 51 | 20.46 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 70 | 20.53 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 88 | 20.56 | radiation | 10 | 1440 | < th | dose independent | rect. | 13 | 4 |
| 169 | 20.70 | radiation | 10 | 1440 | < th | dose independent | rect. | 12 | 15 |
| 196 | 20.76 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 285 | 20.91 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 295 | 20.94 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 323 | 21.01 | radiation | 10 | 1440 | < th | dose independent | sin | 17 | NA |
| 690 | 21.39 | radiation | 10 | 1440 | > th | dose independent | sin | 22 | NA |
| 696 | 21.39 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 6 |
| 778 | 21.43 | radiation | 20 | 1440 | < th | dose dependent | rect. | 2 | 16 |
| 809 | 21.44 | radiation | 20 | 1440 | < th | dose dependent | no | NA | NA |