BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0821800 Os03g0821800|AK102290
         (352 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os03g0821800  Glycosyl transferase, family 2 domain containi...   628   e-180
AK060147                                                          195   3e-50

>Os03g0821800 Glycosyl transferase, family 2 domain containing protein
          Length = 352

 Score =  628 bits (1620), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 310/352 (88%), Positives = 310/352 (88%)

Query: 1   MAAAGWPLSSSVADXXXXXXXXXXXXXXXXXXXXXXXXXFFFEHIRKIGCTHSLERTEVS 60
           MAAAGWPLSSSVAD                         FFFEHIRKIGCTHSLERTEVS
Sbjct: 1   MAAAGWPLSSSVADLLPASLSLTLLLASLVVVVVLAAAAFFFEHIRKIGCTHSLERTEVS 60

Query: 61  AAFFEDPNSLNKVRCPSIYDPAEKYISLIIPAYNEEHRLPEALTETLNYLKQRSAVEKSF 120
           AAFFEDPNSLNKVRCPSIYDPAEKYISLIIPAYNEEHRLPEALTETLNYLKQRSAVEKSF
Sbjct: 61  AAFFEDPNSLNKVRCPSIYDPAEKYISLIIPAYNEEHRLPEALTETLNYLKQRSAVEKSF 120

Query: 121 TYEVLIVDDGSTDHTSKVAFEFVRKHKIDNVRVLLLGRNHGKGEAVRKGMLHSRGELLLM 180
           TYEVLIVDDGSTDHTSKVAFEFVRKHKIDNVRVLLLGRNHGKGEAVRKGMLHSRGELLLM
Sbjct: 121 TYEVLIVDDGSTDHTSKVAFEFVRKHKIDNVRVLLLGRNHGKGEAVRKGMLHSRGELLLM 180

Query: 181 LDADGATKVTDLEKLEAQVRXXXXXXXXXXXXXXXXXQRLSDAEIAVFGSRAHLEKQALA 240
           LDADGATKVTDLEKLEAQVR                 QRLSDAEIAVFGSRAHLEKQALA
Sbjct: 181 LDADGATKVTDLEKLEAQVRALAKKAESSLAPSSSPSQRLSDAEIAVFGSRAHLEKQALA 240

Query: 241 TRKWYRNFLMKGFHLVVLLTAGPGIRDTQCGFKMFTRAAARKLFTNIRLKRWCFDVELVY 300
           TRKWYRNFLMKGFHLVVLLTAGPGIRDTQCGFKMFTRAAARKLFTNIRLKRWCFDVELVY
Sbjct: 241 TRKWYRNFLMKGFHLVVLLTAGPGIRDTQCGFKMFTRAAARKLFTNIRLKRWCFDVELVY 300

Query: 301 LCKHLRIPMAEVSVNWTEIPGSKVRMTSILHMVFELLLIKVGYGLSIWKIYS 352
           LCKHLRIPMAEVSVNWTEIPGSKVRMTSILHMVFELLLIKVGYGLSIWKIYS
Sbjct: 301 LCKHLRIPMAEVSVNWTEIPGSKVRMTSILHMVFELLLIKVGYGLSIWKIYS 352



>AK060147 
          Length = 338

 Score =  195 bits (496), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 113/303 (37%), Positives = 164/303 (54%), Gaps = 30/303 (9%)

Query: 66  DPNSL-NKVRCPSIYDPAEKYISLIIPAYNEEHRLPEALTETLNYL---KQR------SA 115
           DP  +  K +C     P    +S+++P YNEE RLP  L +TL++    K+R      S 
Sbjct: 35  DPAKVFTKFQCKPTQGPT---LSIVVPCYNEEERLPPMLQQTLDFCLDAKKRCVDDATSR 91

Query: 116 VEKSFT-YEVLIVDDGSTDHTSKVAFEFVRKHKIDNVRVLLLGRNHGKGEAVRKGMLHSR 174
            E  F  +E+++VDD S D T+ V  +F + H    ++++ +  N GKG AVR+G   + 
Sbjct: 92  AEGLFADFEIVVVDDCSRDKTADVVTKFAKDHPEAIIKLVRVNPNRGKGFAVRRGFFEAS 151

Query: 175 GELLLMLDADGATKVTDLEKLEAQVRXXXXXXXXXXXXXXXXXQRLSDAEIAVFGSRAHL 234
           G+ +LM D D AT+++D+ KL   +R                        +   GSRAHL
Sbjct: 152 GDYVLMADGDNATQISDVTKLFKALRKPLSSSGQPASNM---------PPVIAIGSRAHL 202

Query: 235 EKQALATRKWYRNFLMKGFHLVVLLTAGPG-------IRDTQCGFKMFTRAAARKLFTNI 287
           E++A+A R ++R  LMK FH VV +T   G       +RDTQCGFK+F R     LF N 
Sbjct: 203 EEKAIARRTFFRTVLMKVFHFVVSVTYFFGTRGSLCKLRDTQCGFKLFDRRVTEILFLNN 262

Query: 288 RLKRWCFDVELVYLCKHLRIPMAEVSVNWTEIPGSKVRMTSILHMVFELLLIKVGYGLSI 347
           RL+RW FDVE++   +   + +AEV V W EIPGSKVR+  ++ M  E LL+   Y L +
Sbjct: 263 RLERWAFDVEILLTARRRGLKVAEVPVRWEEIPGSKVRLRGMVQMGLECLLMCFTYSLGV 322

Query: 348 WKI 350
           W I
Sbjct: 323 WSI 325



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.323    0.137    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,824,816
Number of extensions: 353130
Number of successful extensions: 860
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 857
Number of HSP's successfully gapped: 2
Length of query: 352
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 250
Effective length of database: 11,709,973
Effective search space: 2927493250
Effective search space used: 2927493250
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 156 (64.7 bits)