Os03g0818400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 40S ribosomal protein S23 (S12).
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Os03g0818400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 40S ribosomal protein S23 (S12).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.34 | 0.343 | 10.1 | 0.576 | 0.435 | 0.761 | 0.164 | -0.604 | 0.0456 | 18.8 | 19.9 | 2922 | -- | -- |
| 53.91 | 0.342 | 10.1 | 0.671 | 0.446 | 0.861 | 0.264 | -- | 0.0691 | 18.9 | 19.85 | 2912 | -- | -- |
| 53.4 | 0.34 | 10.1 | 0.571 | 0.438 | 0.763 | -- | -0.614 | 0.0449 | 18.8 | 19.88 | 2900 | -- | -- |
| 53.74 | 0.341 | 10.1 | 0.657 | 0.428 | 0.923 | -- | -- | 0.0693 | 18.7 | 19.5 | 2894 | -- | -- |
| 63.25 | 0.37 | 10.1 | 0.544 | -- | 0.792 | -- | -0.518 | 0.0363 | -- | 20 | 3362 | -- | -- |
| 67.82 | 0.386 | 10 | 1.14 | 0.414 | -- | 0.319 | -- | 0.279 | 19 | -- | -- | -- | -- |
| 68.08 | 0.386 | 10 | 1.14 | 0.416 | -- | -- | -- | 0.28 | 18.9 | -- | -- | -- | -- |
| 63.49 | 0.371 | 10 | 0.656 | -- | 0.914 | -- | -- | 0.0814 | -- | 19.5 | 3354 | -- | -- |
| 54.13 | 0.343 | 10.1 | -- | 0.411 | 1.16 | -- | -- | -0.0946 | 18.5 | 19.09 | 21719 | -- | -- |
| 77.16 | 0.41 | 10 | 1.13 | -- | -- | -- | -- | 0.272 | -- | -- | -- | -- | -- |
| 102.07 | 0.473 | 10 | -- | 0.404 | -- | -- | -- | 0.153 | 19.1 | -- | -- | -- | -- |
| 63.1 | 0.37 | 10.1 | -- | -- | 1.15 | -- | -- | -0.106 | -- | 19.07 | 21754 | -- | -- |
| 110.65 | 0.491 | 10 | -- | -- | -- | -- | -- | 0.147 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.31 | humidity | 90 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 2 | 51.33 | humidity | 90 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 4 | 51.41 | humidity | 90 | 43200 | < th | dose independent | rect. | 14 | 4 |
| 5 | 51.41 | humidity | 90 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 29 | 51.88 | humidity | 90 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 52 | 52.29 | humidity | 80 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 60 | 52.34 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 80 | 52.44 | radiation | 1 | 14400 | < th | dose independent | rect. | 20 | 11 |
| 82 | 52.45 | radiation | 1 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 84 | 52.45 | radiation | 1 | 14400 | < th | dose independent | rect. | 24 | 7 |
| 85 | 52.45 | radiation | 1 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 89 | 52.46 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 112 | 52.51 | temperature | 20 | 4320 | < th | dose dependent | rect. | 17 | 2 |
| 113 | 52.52 | wind | 3 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 115 | 52.52 | wind | 5 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 130 | 52.59 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 136 | 52.61 | humidity | 80 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 152 | 52.61 | humidity | 80 | 43200 | > th | dose dependent | rect. | 10 | 8 |
| 160 | 52.65 | humidity | 90 | 43200 | > th | dose dependent | rect. | 13 | 7 |
| 170 | 52.69 | humidity | 90 | 43200 | > th | dose independent | sin | 22 | NA |
| 213 | 52.82 | humidity | 90 | 43200 | < th | dose independent | sin | 22 | NA |
| 237 | 52.84 | humidity | 60 | 43200 | < th | dose dependent | rect. | 24 | 9 |
| 281 | 52.94 | humidity | 80 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 284 | 52.94 | radiation | 1 | 14400 | > th | dose independent | rect. | 14 | 17 |
| 285 | 52.94 | radiation | 1 | 14400 | > th | dose independent | rect. | 11 | 20 |
| 296 | 52.96 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 22 |
| 324 | 53.00 | humidity | 90 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 338 | 53.01 | temperature | 20 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 346 | 53.02 | humidity | 90 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 359 | 53.03 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 22 |
| 362 | 53.03 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 369 | 53.05 | radiation | 1 | 14400 | > th | dose independent | sin | 11 | NA |
| 371 | 53.05 | humidity | 90 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 375 | 53.05 | humidity | 80 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 383 | 53.07 | radiation | 1 | 14400 | < th | dose independent | rect. | 11 | 20 |
| 389 | 53.07 | temperature | 20 | 43200 | < th | dose dependent | rect. | 16 | 8 |
| 394 | 53.08 | radiation | 1 | 14400 | < th | dose independent | rect. | 14 | 17 |
| 406 | 53.09 | radiation | 1 | 14400 | < th | dose independent | rect. | 16 | 15 |
| 431 | 53.11 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 432 | 53.11 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 433 | 53.11 | radiation | 1 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 440 | 53.11 | radiation | 1 | 14400 | < th | dose independent | rect. | 24 | 16 |
| 443 | 53.11 | radiation | 1 | 14400 | < th | dose independent | rect. | 22 | 18 |
| 479 | 53.13 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 497 | 53.14 | radiation | 1 | 14400 | < th | dose independent | sin | 11 | NA |
| 498 | 53.14 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 520 | 53.14 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 536 | 53.15 | temperature | 20 | 43200 | < th | dose dependent | sin | 17 | NA |
| 538 | 53.15 | temperature | 25 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 683 | 53.23 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 684 | 53.23 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 706 | 53.24 | radiation | 1 | 14400 | > th | dose independent | sin | 3 | NA |
| 729 | 53.25 | radiation | 1 | 14400 | < th | dose independent | sin | 3 | NA |
| 731 | 53.25 | temperature | 20 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 732 | 53.25 | wind | 3 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 743 | 53.25 | radiation | 1 | 14400 | < th | dose dependent | rect. | 20 | 10 |
| 747 | 53.26 | radiation | 1 | 14400 | > th | dose independent | no | NA | NA |
| 802 | 53.26 | radiation | 1 | 14400 | < th | dose dependent | rect. | 22 | 8 |
| 814 | 53.27 | radiation | 1 | 14400 | > th | dose independent | rect. | 16 | 23 |
| 830 | 53.28 | wind | 3 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 851 | 53.28 | humidity | 90 | 43200 | > th | dose dependent | sin | 22 | NA |
| 919 | 53.32 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 12 |
| 986 | 53.35 | radiation | 1 | 14400 | < th | dose independent | no | NA | NA |