Os03g0817000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Actin-binding WH2 domain containing protein.
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Os03g0817000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Actin-binding WH2 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57.81 | 0.357 | 10.6 | 0.984 | 1.38 | 0.62 | -1.54 | 3.33 | 0.16 | 14.4 | 10.77 | 233 | -- | -- |
| 63.09 | 0.37 | 10.7 | 0.568 | 1.46 | 0.628 | -1.02 | -- | 0.0783 | 13.9 | 24.31 | 587 | -- | -- |
| 59 | 0.358 | 10.6 | 1.13 | 1.57 | 0.504 | -- | 3.49 | 0.199 | 14.3 | 14.4 | 875 | -- | -- |
| 64.49 | 0.374 | 10.6 | 0.553 | 1.54 | 0.524 | -- | -- | 0.15 | 14.2 | 29.11 | 755 | -- | -- |
| 137.68 | 0.549 | 10.8 | 0.142 | -- | 1.8 | -- | -0.235 | -0.225 | -- | 20.68 | 74 | -- | -- |
| 69.02 | 0.389 | 10.7 | 0.609 | 1.56 | -- | -0.814 | -- | 0.117 | 14.6 | -- | -- | -- | -- |
| 71.36 | 0.396 | 10.7 | 0.589 | 1.56 | -- | -- | -- | 0.112 | 14.6 | -- | -- | -- | -- |
| 136.04 | 0.543 | 10.7 | 0.255 | -- | 1.77 | -- | -- | -0.127 | -- | 24.06 | 13 | -- | -- |
| 70.51 | 0.391 | 10.7 | -- | 1.52 | 0.648 | -- | -- | 0.111 | 14.2 | 29.07 | 777 | -- | -- |
| 213.84 | 0.683 | 10.7 | 0.522 | -- | -- | -- | -- | 0.073 | -- | -- | -- | -- | -- |
| 80.5 | 0.42 | 10.7 | -- | 1.55 | -- | -- | -- | 0.0467 | 14.6 | -- | -- | -- | -- |
| 137.64 | 0.546 | 10.7 | -- | -- | 1.81 | -- | -- | -0.166 | -- | 23.95 | 17 | -- | -- |
| 221.03 | 0.694 | 10.7 | -- | -- | -- | -- | -- | 0.015 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 56.44 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 2 | 56.74 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 7 | 57.04 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 13 |
| 15 | 57.22 | temperature | 10 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 21 | 57.36 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 11 |
| 36 | 57.49 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 22 |
| 56 | 57.69 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 71 | 57.84 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 84 | 57.90 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 102 | 57.99 | temperature | 10 | 270 | > th | dose dependent | sin | 12 | NA |
| 109 | 58.03 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 119 | 58.08 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 120 | 58.08 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 23 |
| 140 | 58.17 | temperature | 10 | 720 | > th | dose dependent | sin | 16 | NA |
| 166 | 58.25 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 22 |
| 168 | 58.26 | temperature | 30 | 270 | < th | dose independent | rect. | 16 | 14 |
| 172 | 58.26 | temperature | 10 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 176 | 58.27 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 18 |
| 202 | 58.33 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 246 | 58.45 | temperature | 30 | 270 | < th | dose independent | rect. | 24 | 21 |
| 260 | 58.48 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 20 |
| 270 | 58.50 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 18 |
| 278 | 58.53 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 316 | 58.62 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 426 | 58.78 | temperature | 15 | 30 | > th | dose dependent | rect. | 23 | 21 |
| 429 | 58.78 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 479 | 58.85 | temperature | 30 | 270 | < th | dose dependent | rect. | 16 | 15 |
| 541 | 58.91 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 20 |
| 558 | 58.92 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 595 | 58.95 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 20 |
| 703 | 59.03 | temperature | 25 | 1440 | < th | dose dependent | sin | 18 | NA |
| 872 | 59.11 | temperature | 30 | 270 | < th | dose dependent | sin | 11 | NA |
| 930 | 59.13 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |