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Os03g0815700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : KH domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.0214) R2 : 0.572
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.928 (0.0558) R2dC : 0.267 R2C : 0.309
β3 : 0.966 (0.077) R2dE : 0.16 R2E : 0.256
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.321 (0.046) R2dN8 : 0.0625 R2N8 : 0.0835
σ : 0.399
deviance : 73.38
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C
peak time of C : 19.2
E
wheather : temperature
threshold : 19.79
memory length : 522
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
73.16 0.402 10.4 -0.112 0.929 0.96 0.0354 -0.238 0.301 19.2 19.8 547 -- --
73.25 0.399 10.4 -0.0778 0.922 0.996 -0.04 -- 0.306 19.2 19.8 533 -- --
73.14 0.398 10.4 -0.11 0.928 0.964 -- -0.219 0.301 19.2 19.8 536 -- --
73.25 0.399 10.4 -0.0759 0.924 0.993 -- -- 0.309 19.2 19.8 522 -- --
116.81 0.503 10.4 -0.153 -- 1.28 -- 0.131 0.252 -- 19.6 530 -- --
96.71 0.461 10.3 0.273 1.04 -- 0.019 -- 0.489 19.3 -- -- -- --
96.71 0.461 10.3 0.273 1.04 -- -- -- 0.489 19.3 -- -- -- --
116.84 0.503 10.3 -0.187 -- 1.26 -- -- 0.25 -- 19.67 531 -- --
73.38 0.399 10.4 -- 0.928 0.966 -- -- 0.321 19.2 19.79 522 -- --
154.06 0.58 10.3 0.255 -- -- -- -- 0.471 -- -- -- -- --
98.67 0.465 10.3 -- 1.04 -- -- -- 0.458 19.3 -- -- -- --
117.65 0.505 10.3 -- -- 1.2 -- -- 0.28 -- 19.69 530 -- --
155.77 0.583 10.3 -- -- -- -- -- 0.443 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 68.38 wind 3.0 43200 < th dose dependent rect. 4 2
2 69.09 wind 1.0 43200 > th dose dependent rect. 5 1
3 69.20 humidity 80.0 14400 > th dose dependent rect. 13 1
4 69.20 wind 3.0 43200 < th dose dependent rect. 3 4
5 69.39 wind 7.0 43200 < th dose dependent rect. 5 1
8 69.43 wind 3.0 43200 < th dose dependent rect. 1 6
19 69.93 humidity 80.0 14400 > th dose independent rect. 13 3
24 70.15 wind 3.0 43200 > th dose independent rect. 5 1
25 70.15 wind 5.0 43200 < th dose dependent rect. 23 9
29 70.23 wind 9.0 14400 > th dose dependent rect. 6 5
30 70.26 wind 3.0 43200 < th dose independent rect. 5 1
46 70.59 wind 1.0 43200 > th dose dependent rect. 4 3
52 70.67 wind 9.0 14400 > th dose dependent rect. 9 2
64 70.88 humidity 80.0 14400 < th dose independent rect. 14 1
71 70.94 wind 1.0 43200 > th dose dependent rect. 23 9
83 71.08 wind 9.0 14400 < th dose independent rect. 8 3
91 71.17 wind 3.0 43200 < th dose independent rect. 5 4
103 71.27 wind 3.0 43200 > th dose independent rect. 5 4
163 71.86 wind 3.0 43200 < th dose independent rect. 7 1
174 71.94 wind 9.0 43200 < th dose dependent rect. 7 1
175 71.95 wind 9.0 14400 > th dose independent rect. 7 4
184 72.06 wind 1.0 43200 > th dose dependent rect. 7 1
185 72.07 precipitation 0.1 14400 < th dose independent rect. 17 1
186 72.07 precipitation 0.1 14400 < th dose dependent rect. 17 1
189 72.10 wind 3.0 43200 > th dose independent rect. 7 1
193 72.21 precipitation 0.1 14400 > th dose independent rect. 17 1
198 72.24 wind 3.0 43200 < th dose independent rect. 1 8
201 72.27 wind 3.0 43200 < th dose independent rect. 23 10
217 72.35 wind 9.0 14400 > th dose independent rect. 9 2
226 72.41 wind 3.0 43200 > th dose independent rect. 1 8
252 72.67 precipitation 0.1 14400 < th dose independent rect. 7 9
253 72.67 precipitation 0.1 14400 < th dose dependent rect. 7 9
288 72.89 temperature 20.0 720 > th dose independent rect. 10 21
295 72.93 precipitation 0.1 14400 < th dose independent rect. 9 7
296 72.93 precipitation 0.1 14400 < th dose dependent rect. 9 7
298 72.94 precipitation 0.1 14400 > th dose independent rect. 7 9
366 73.22 precipitation 0.1 14400 > th dose independent rect. 9 7
430 73.47 precipitation 0.1 14400 > th dose dependent rect. 6 10
433 73.48 wind 3.0 43200 > th dose independent rect. 3 9
457 73.54 precipitation 0.1 14400 < th dose independent rect. 7 7
461 73.54 precipitation 0.1 14400 < th dose dependent rect. 7 7
462 73.56 temperature 20.0 720 > th dose independent rect. 18 21
517 73.72 temperature 20.0 720 < th dose independent rect. 9 20
518 73.72 temperature 20.0 720 < th dose independent rect. 6 22
523 73.74 temperature 20.0 720 > th dose independent rect. 3 21
531 73.76 temperature 20.0 720 < th dose independent rect. 9 22
538 73.77 temperature 20.0 720 > th dose independent rect. 1 23
549 73.80 temperature 20.0 720 > th dose independent rect. 3 23
550 73.80 wind 5.0 43200 < th dose dependent sin 8 NA
563 73.83 precipitation 0.1 14400 > th dose independent rect. 7 7
574 73.87 humidity 80.0 43200 < th dose independent rect. 6 1
594 73.92 precipitation 0.1 14400 < th dose independent rect. 9 5
598 73.92 precipitation 0.1 14400 < th dose dependent rect. 9 5
677 74.14 temperature 20.0 720 > th dose independent no NA NA
683 74.16 temperature 20.0 720 < th dose independent rect. 3 23
692 74.18 temperature 20.0 720 > th dose independent rect. 5 23
695 74.19 precipitation 0.1 14400 > th dose independent rect. 9 5
721 74.28 wind 1.0 43200 > th dose independent rect. 18 12
729 74.30 temperature 20.0 720 < th dose independent no NA NA
764 74.41 wind 3.0 43200 < th dose independent sin 7 NA
776 74.44 wind 1.0 43200 > th dose dependent sin 8 NA
791 74.48 humidity 80.0 14400 > th dose independent rect. 10 1
802 74.49 temperature 20.0 720 > th dose independent rect. 21 23
803 74.49 temperature 20.0 720 < th dose independent rect. 18 23
860 74.60 wind 1.0 14400 > th dose dependent rect. 1 2
866 74.62 wind 1.0 43200 < th dose independent rect. 18 12
869 74.63 wind 9.0 4320 > th dose independent rect. 11 1
880 74.65 temperature 20.0 720 < th dose independent rect. 24 23
906 74.72 temperature 20.0 720 > th dose independent rect. 23 23
908 74.73 wind 3.0 43200 > th dose independent sin 7 NA
921 74.75 humidity 80.0 43200 > th dose independent rect. 6 1
923 74.75 temperature 30.0 14400 < th dose dependent rect. 13 1
937 74.80 temperature 20.0 720 < th dose independent sin 13 NA
952 74.83 precipitation 0.1 14400 > th dose independent rect. 9 1
953 74.83 precipitation 0.1 14400 > th dose dependent rect. 9 1
987 74.92 temperature 20.0 720 > th dose independent sin 14 NA