Os03g0809200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Transcription factor EmBP-1 (Fragment).
FiT-DB / Search/ Help/ Sample detail
|
Os03g0809200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Transcription factor EmBP-1 (Fragment).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 259.64 | 0.757 | 3.44 | -1.03 | 0.76 | 1.24 | -0.844 | -0.0996 | -0.00531 | 12.4 | 0.6902 | 1383 | -- | -- |
| 259.63 | 0.75 | 3.44 | -1.02 | 0.772 | 1.27 | -0.83 | -- | -0.00544 | 12.4 | 0.69 | 1380 | -- | -- |
| 262.11 | 0.754 | 3.44 | -1.01 | 0.843 | 1.46 | -- | 0.603 | -0.00781 | 12.1 | 0.6922 | 1366 | -- | -- |
| 262.41 | 0.754 | 3.44 | -1.06 | 0.826 | 1.36 | -- | -- | -0.0109 | 12.1 | 0.6923 | 1366 | -- | -- |
| 274.13 | 0.771 | 3.46 | -0.95 | -- | 1.54 | -- | 0.558 | -0.0348 | -- | 0.69 | 1585 | -- | -- |
| 278.44 | 0.782 | 3.4 | -0.73 | 0.593 | -- | -1.03 | -- | 0.166 | 12.9 | -- | -- | -- | -- |
| 282.75 | 0.787 | 3.4 | -0.769 | 0.595 | -- | -- | -- | 0.16 | 12.5 | -- | -- | -- | -- |
| 271.38 | 0.767 | 3.44 | -0.989 | -- | 1.4 | -- | -- | 0.023 | -- | 0.6937 | 1679 | -- | -- |
| 290.41 | 0.794 | 3.43 | -- | 0.812 | 1.13 | -- | -- | 0.121 | 12.2 | 0.6301 | 1318 | -- | -- |
| 304.98 | 0.816 | 3.41 | -0.79 | -- | -- | -- | -- | 0.15 | -- | -- | -- | -- | -- |
| 298.33 | 0.808 | 3.38 | -- | 0.607 | -- | -- | -- | 0.245 | 12.6 | -- | -- | -- | -- |
| 294.5 | 0.799 | 3.42 | -- | -- | 1.24 | -- | -- | 0.123 | -- | 1.61 | 1672 | -- | -- |
| 321.43 | 0.837 | 3.39 | -- | -- | -- | -- | -- | 0.237 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 249.86 | temperature | 20 | 30 | > th | dose dependent | rect. | 20 | 18 |
| 2 | 249.89 | temperature | 20 | 30 | > th | dose dependent | rect. | 20 | 16 |
| 4 | 250.44 | humidity | 90 | 30 | < th | dose dependent | rect. | 8 | 6 |
| 13 | 251.66 | temperature | 20 | 30 | > th | dose dependent | rect. | 24 | 12 |
| 14 | 251.71 | temperature | 20 | 90 | < th | dose dependent | rect. | 11 | 9 |
| 16 | 251.76 | temperature | 20 | 90 | < th | dose dependent | rect. | 9 | 11 |
| 22 | 252.03 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 18 |
| 27 | 252.14 | humidity | 90 | 30 | < th | dose dependent | rect. | 24 | 14 |
| 43 | 252.58 | temperature | 20 | 30 | > th | dose dependent | rect. | 24 | 14 |
| 59 | 253.04 | temperature | 20 | 90 | < th | dose independent | rect. | 10 | 9 |
| 60 | 253.06 | humidity | 90 | 270 | < th | dose dependent | rect. | 8 | 2 |
| 80 | 253.42 | humidity | 90 | 30 | < th | dose dependent | rect. | 20 | 18 |
| 81 | 253.44 | humidity | 90 | 30 | < th | dose dependent | rect. | 22 | 16 |
| 93 | 253.61 | humidity | 80 | 270 | < th | dose independent | rect. | 7 | 5 |
| 104 | 253.78 | humidity | 90 | 30 | < th | dose dependent | sin | 3 | NA |
| 140 | 254.32 | temperature | 20 | 90 | > th | dose dependent | sin | 6 | NA |
| 285 | 255.56 | temperature | 20 | 90 | < th | dose dependent | rect. | 12 | 7 |
| 359 | 256.03 | temperature | 20 | 90 | < th | dose independent | rect. | 18 | 1 |
| 360 | 256.03 | temperature | 20 | 90 | < th | dose dependent | rect. | 18 | 1 |
| 367 | 256.05 | humidity | 60 | 30 | > th | dose dependent | sin | 3 | NA |
| 384 | 256.15 | wind | 7 | 10 | > th | dose independent | rect. | 19 | 1 |
| 386 | 256.15 | wind | 7 | 10 | > th | dose dependent | rect. | 19 | 1 |
| 400 | 256.20 | temperature | 20 | 90 | < th | dose dependent | rect. | 15 | 4 |
| 411 | 256.22 | temperature | 20 | 90 | < th | dose independent | rect. | 15 | 4 |
| 435 | 256.30 | temperature | 15 | 270 | > th | dose dependent | rect. | 7 | 5 |
| 451 | 256.37 | humidity | 80 | 10 | < th | dose independent | rect. | 8 | 8 |
| 511 | 256.66 | temperature | 25 | 270 | > th | dose independent | rect. | 18 | 18 |
| 625 | 257.20 | temperature | 20 | 30 | > th | dose dependent | rect. | 8 | 6 |
| 703 | 257.48 | humidity | 80 | 10 | < th | dose independent | rect. | 1 | 13 |
| 731 | 257.61 | temperature | 30 | 90 | < th | dose dependent | sin | 6 | NA |
| 762 | 257.74 | wind | 7 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 778 | 257.86 | wind | 9 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 951 | 258.47 | wind | 9 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 964 | 258.51 | humidity | 60 | 90 | > th | dose dependent | rect. | 1 | 16 |