Os03g0807100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF239, plant domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0807100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF239, plant domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 214.94 | 0.689 | 7.07 | -3.66 | 1.67 | 2.91 | 1.92 | -1.87 | -1.24 | 23.7 | 15.02 | 114 | -- | -- |
| 217.13 | 0.686 | 7.03 | -3.39 | 1.68 | 2.99 | 2.3 | -- | -1.16 | 23.8 | 14.7 | 118 | -- | -- |
| 228.32 | 0.709 | 7.11 | -3.93 | 1.83 | 2.65 | -- | -3.63 | -1.3 | 23.1 | 16.17 | 124 | -- | -- |
| 238.38 | 0.719 | 7.04 | -3.43 | 1.62 | 2.79 | -- | -- | -1.14 | 23.5 | 14.18 | 131 | -- | -- |
| 287.81 | 0.79 | 7.08 | -4.07 | -- | 2.49 | -- | -3.03 | -1.29 | -- | 22.2 | 751 | -- | -- |
| 306.5 | 0.821 | 6.95 | -2.8 | 1.4 | -- | 1.59 | -- | -0.757 | 21.9 | -- | -- | -- | -- |
| 315.31 | 0.832 | 6.96 | -2.86 | 1.41 | -- | -- | -- | -0.757 | 21.5 | -- | -- | -- | -- |
| 279.39 | 0.778 | 7.03 | -3.65 | -- | 3.11 | -- | -- | -1.24 | -- | 7.867 | 749 | -- | -- |
| 516.6 | 1.06 | 6.92 | -- | 1.53 | 1.15 | -- | -- | -0.576 | 22.1 | 13.05 | 114 | -- | -- |
| 431.93 | 0.971 | 6.92 | -2.85 | -- | -- | -- | -- | -0.761 | -- | -- | -- | -- | -- |
| 530.78 | 1.08 | 6.88 | -- | 1.41 | -- | -- | -- | -0.438 | 21.3 | -- | -- | -- | -- |
| 578.08 | 1.12 | 6.87 | -- | -- | 1.46 | -- | -- | -0.582 | -- | 23.81 | 739 | -- | -- |
| 646.15 | 1.19 | 6.85 | -- | -- | -- | -- | -- | -0.445 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 211.64 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 2 | 211.67 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 16 | 215.58 | temperature | 15 | 90 | > th | dose dependent | no | NA | NA |
| 19 | 216.90 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 20 | 216.91 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 31 | 218.08 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 35 | 218.24 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 19 |
| 36 | 218.28 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 39 | 218.39 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 17 |
| 47 | 218.63 | temperature | 10 | 720 | > th | dose dependent | rect. | 24 | 19 |
| 51 | 218.79 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 21 |
| 52 | 218.86 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 57 | 219.00 | temperature | 15 | 270 | > th | dose dependent | rect. | 24 | 23 |
| 77 | 220.07 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 78 | 220.13 | temperature | 30 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 82 | 220.24 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 94 | 220.57 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 107 | 220.78 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 129 | 221.30 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 151 | 221.84 | temperature | 15 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 164 | 222.05 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 166 | 222.13 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 195 | 222.57 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 254 | 223.82 | temperature | 15 | 720 | > th | dose dependent | sin | 1 | NA |
| 313 | 224.89 | temperature | 25 | 720 | > th | dose independent | rect. | 21 | 22 |
| 340 | 225.49 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 353 | 225.74 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 359 | 225.87 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 23 |
| 387 | 226.36 | temperature | 20 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 392 | 226.44 | temperature | 10 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 393 | 226.47 | temperature | 30 | 4320 | < th | dose dependent | rect. | 24 | 1 |
| 404 | 226.66 | temperature | 15 | 10 | > th | dose dependent | sin | 19 | NA |
| 613 | 228.39 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 17 |
| 639 | 228.59 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 651 | 228.66 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 730 | 229.05 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 13 |
| 732 | 229.07 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 19 |
| 818 | 229.44 | temperature | 25 | 4320 | < th | dose dependent | sin | 12 | NA |