BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0807100 Os03g0807100|011-007-H04
(102 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G55360.1 | chr1:20666526-20668502 REVERSE LENGTH=423 117 1e-27
AT3G13510.1 | chr3:4403776-4405741 FORWARD LENGTH=420 114 9e-27
AT5G56530.1 | chr5:22889382-22891439 FORWARD LENGTH=421 112 5e-26
AT1G10750.1 | chr1:3574986-3578310 REVERSE LENGTH=468 100 1e-22
AT5G50150.1 | chr5:20402444-20406375 REVERSE LENGTH=421 96 3e-21
AT2G44210.2 | chr2:18280809-18282591 FORWARD LENGTH=446 93 3e-20
AT5G18460.1 | chr5:6123205-6126505 FORWARD LENGTH=431 92 4e-20
AT1G70550.1 | chr1:26597510-26599888 FORWARD LENGTH=466 92 5e-20
AT1G23340.1 | chr1:8284158-8286528 REVERSE LENGTH=410 91 9e-20
AT2G44240.1 | chr2:18289964-18292204 FORWARD LENGTH=403 71 1e-13
AT2G17750.1 | chr2:7709238-7711151 REVERSE LENGTH=397 70 2e-13
AT2G44220.1 | chr2:18283803-18285690 FORWARD LENGTH=404 69 5e-13
AT5G19170.1 | chr5:6445245-6447305 FORWARD LENGTH=392 68 9e-13
AT2G03930.2 | chr2:1204920-1206249 REVERSE LENGTH=165 66 3e-12
AT3G48230.1 | chr3:17855715-17858019 FORWARD LENGTH=374 63 2e-11
AT2G44250.1 | chr2:18293457-18295414 FORWARD LENGTH=410 62 7e-11
AT2G19360.1 | chr2:8378664-8383374 FORWARD LENGTH=427 57 2e-09
AT5G25960.1 | chr5:9062917-9065011 REVERSE LENGTH=353 50 2e-07
AT5G25950.1 | chr5:9057929-9059860 REVERSE LENGTH=433 47 2e-06
>AT1G55360.1 | chr1:20666526-20668502 REVERSE LENGTH=423
Length = 422
Score = 117 bits (292), Expect = 1e-27, Method: Composition-based stats.
Identities = 50/58 (86%), Positives = 56/58 (96%)
Query: 34 QHAIAYVQGDKYYGAKATINVWAPKIEQPNEFSLSQLWILGGSFGEDLNSIEAGWQVA 91
QHAIAYV+GDKYYGAKATINVW PKI+Q NEFSLSQ+W+LGGSFG+DLNSIEAGWQV+
Sbjct: 175 QHAIAYVEGDKYYGAKATINVWEPKIQQQNEFSLSQIWLLGGSFGQDLNSIEAGWQVS 232
>AT3G13510.1 | chr3:4403776-4405741 FORWARD LENGTH=420
Length = 419
Score = 114 bits (285), Expect = 9e-27, Method: Composition-based stats.
Identities = 48/58 (82%), Positives = 55/58 (94%)
Query: 34 QHAIAYVQGDKYYGAKATINVWAPKIEQPNEFSLSQLWILGGSFGEDLNSIEAGWQVA 91
QHAIAYV+GDKYYGAKAT+NVW PKI+ NEFSLSQ+W+LGGSFG+DLNSIEAGWQV+
Sbjct: 172 QHAIAYVEGDKYYGAKATLNVWEPKIQNTNEFSLSQIWLLGGSFGQDLNSIEAGWQVS 229
>AT5G56530.1 | chr5:22889382-22891439 FORWARD LENGTH=421
Length = 420
Score = 112 bits (279), Expect = 5e-26, Method: Composition-based stats.
Identities = 48/58 (82%), Positives = 54/58 (93%)
Query: 34 QHAIAYVQGDKYYGAKATINVWAPKIEQPNEFSLSQLWILGGSFGEDLNSIEAGWQVA 91
QHAIAYV+G K+YGAKATINVW PK++ NEFSLSQLWILGGSFG+DLNSIEAGWQV+
Sbjct: 173 QHAIAYVEGGKFYGAKATINVWEPKVQSSNEFSLSQLWILGGSFGQDLNSIEAGWQVS 230
>AT1G10750.1 | chr1:3574986-3578310 REVERSE LENGTH=468
Length = 467
Score = 100 bits (250), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/58 (68%), Positives = 51/58 (87%)
Query: 34 QHAIAYVQGDKYYGAKATINVWAPKIEQPNEFSLSQLWILGGSFGEDLNSIEAGWQVA 91
+HA+ YV G+KYYGAKA+INVWAP+++ EFSLSQ+WI+ GSFG DLN+IEAGWQV+
Sbjct: 220 EHAVGYVSGEKYYGAKASINVWAPQVQNQYEFSLSQIWIISGSFGNDLNTIEAGWQVS 277
>AT5G50150.1 | chr5:20402444-20406375 REVERSE LENGTH=421
Length = 420
Score = 96.3 bits (238), Expect = 3e-21, Method: Composition-based stats.
Identities = 37/58 (63%), Positives = 50/58 (86%)
Query: 34 QHAIAYVQGDKYYGAKATINVWAPKIEQPNEFSLSQLWILGGSFGEDLNSIEAGWQVA 91
+HA+ +V G++YYGAKA+INVWAP++ EFSLSQ+W++ GSFG DLN+IEAGWQV+
Sbjct: 173 EHAVVFVNGEQYYGAKASINVWAPRVTDAYEFSLSQIWLISGSFGHDLNTIEAGWQVS 230
>AT2G44210.2 | chr2:18280809-18282591 FORWARD LENGTH=446
Length = 445
Score = 93.2 bits (230), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 48/58 (82%)
Query: 34 QHAIAYVQGDKYYGAKATINVWAPKIEQPNEFSLSQLWILGGSFGEDLNSIEAGWQVA 91
QHAI YV+ +YGAKA INVW P +E PNEFSL+Q+W+LGG+F DLNSIEAGWQV+
Sbjct: 197 QHAIMYVEDGVFYGAKAKINVWKPDVEMPNEFSLAQIWVLGGNFNSDLNSIEAGWQVS 254
>AT5G18460.1 | chr5:6123205-6126505 FORWARD LENGTH=431
Length = 430
Score = 92.4 bits (228), Expect = 4e-20, Method: Composition-based stats.
Identities = 44/60 (73%), Positives = 50/60 (83%), Gaps = 2/60 (3%)
Query: 34 QHAIAYVQGD-KYYGAKATINVWAPKIEQPNEFSLSQLWILGGSF-GEDLNSIEAGWQVA 91
+HAIAY + + YGAKATINVW PKIE+ NEFSLSQ+WIL GSF G DLNSIEAGWQV+
Sbjct: 181 EHAIAYTESSSEIYGAKATINVWDPKIEEVNEFSLSQIWILSGSFVGPDLNSIEAGWQVS 240
>AT1G70550.1 | chr1:26597510-26599888 FORWARD LENGTH=466
Length = 465
Score = 92.4 bits (228), Expect = 5e-20, Method: Composition-based stats.
Identities = 35/58 (60%), Positives = 48/58 (82%)
Query: 34 QHAIAYVQGDKYYGAKATINVWAPKIEQPNEFSLSQLWILGGSFGEDLNSIEAGWQVA 91
+HA+ YV G +YYGAKA+INVW+P++ EFSLSQ+W++ GSF DLN+IEAGWQ++
Sbjct: 218 EHAVGYVTGRQYYGAKASINVWSPRVTSQYEFSLSQIWVIAGSFTHDLNTIEAGWQIS 275
>AT1G23340.1 | chr1:8284158-8286528 REVERSE LENGTH=410
Length = 409
Score = 91.3 bits (225), Expect = 9e-20, Method: Composition-based stats.
Identities = 36/58 (62%), Positives = 47/58 (81%)
Query: 34 QHAIAYVQGDKYYGAKATINVWAPKIEQPNEFSLSQLWILGGSFGEDLNSIEAGWQVA 91
+HA+ YV G +YYGAKA+INVW P++ EFSLSQ+WI+ GSF DLN+IEAGWQ++
Sbjct: 162 EHAVGYVSGSQYYGAKASINVWTPRVISQYEFSLSQIWIIAGSFAGDLNTIEAGWQIS 219
>AT2G44240.1 | chr2:18289964-18292204 FORWARD LENGTH=403
Length = 402
Score = 70.9 bits (172), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 34 QHAIAYVQGDKYYGAKATINVWAPKIEQPNEFSLSQLWILGGSFGEDLNSIEAGWQV 90
++A V+ K+YG KA+INVW P + P+EFSLSQ WI+ G G N+IEAGWQV
Sbjct: 156 EYAFMGVRNGKFYGTKASINVWKPDVATPSEFSLSQTWIVSGD-GTSRNTIEAGWQV 211
>AT2G17750.1 | chr2:7709238-7711151 REVERSE LENGTH=397
Length = 396
Score = 70.5 bits (171), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
Query: 35 HAIAYVQGD-KYYGAKATINVWAPKIEQPNEFSLSQLWILGGSFGEDLNSIEAGWQV 90
H A +Q K++GA A INVW P ++ P EFSL+Q+W++ G F E +NS+EAGWQV
Sbjct: 152 HEYAQIQAKGKFHGAHADINVWKPFVQTPKEFSLAQMWVMAGPFSE-VNSVEAGWQV 207
>AT2G44220.1 | chr2:18283803-18285690 FORWARD LENGTH=404
Length = 403
Score = 68.9 bits (167), Expect = 5e-13, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 34 QHAIAYVQGDKYYGAKATINVWAPKIEQPNEFSLSQLWILGGSFGEDLNSIEAGWQV 90
Q+A+ V+ K+YG + IN+W P ++ P EFSL+Q W++ G+ G LN+IEAGWQV
Sbjct: 156 QYALMGVRNGKFYGTEVAINLWKPYVQIPKEFSLAQTWVVSGN-GSSLNTIEAGWQV 211
>AT5G19170.1 | chr5:6445245-6447305 FORWARD LENGTH=392
Length = 391
Score = 68.2 bits (165), Expect = 9e-13, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 34 QHAIAY-VQGDKYYGAKATINVWAPKIEQPNEFSLSQLWILGGSF-GEDLNSIEAGWQVA 91
++AIAY + YG +AT NVW PK+E +FSL+Q+W+ GS+ DLN++EAGWQV+
Sbjct: 121 KYAIAYMINRTNVYGTRATFNVWTPKVESAYDFSLAQIWLASGSYETADLNTVEAGWQVS 180
>AT2G03930.2 | chr2:1204920-1206249 REVERSE LENGTH=165
Length = 164
Score = 66.2 bits (160), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 34 QHAI-AYVQGDKYYGAKATINVWAPKIEQPNEFSLSQLWILGGSFGE-DLNSIEAGWQV 90
+HA+ + + K YGA ATI+VW P +E +EFSLS +WI GS+ + +LNSIEAGWQV
Sbjct: 43 EHAVGSTITSTKMYGANATISVWDPTVESRDEFSLSLIWITSGSYNKNNLNSIEAGWQV 101
>AT3G48230.1 | chr3:17855715-17858019 FORWARD LENGTH=374
Length = 373
Score = 63.2 bits (152), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 41/56 (73%), Gaps = 4/56 (7%)
Query: 37 IAYVQGDKYYGAKATINVWAPKIEQ-PNEFSLSQLWILGGSFGE-DLNSIEAGWQV 90
+ Y++G YG AT+NVW P +E NEFSLSQ+W++ G + + DLN++EAGWQV
Sbjct: 129 VVYLRG--IYGTVATMNVWNPSVEHGTNEFSLSQIWLVAGHYNDSDLNTVEAGWQV 182
>AT2G44250.1 | chr2:18293457-18295414 FORWARD LENGTH=410
Length = 409
Score = 61.6 bits (148), Expect = 7e-11, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 32 VLQHAIAYVQGDKYYGAKATINVWAPKIEQPNEFSLSQLWILGGSFGEDLNSIEAGWQV 90
V +HA Y+ +Y+G+K+ I++W P + EFSL+Q W++GG + LN++E+GWQ+
Sbjct: 159 VHEHASVYLDYGEYHGSKSRISIWRPDVNM-TEFSLAQTWVVGGDWDTVLNTVESGWQI 216
>AT2G19360.1 | chr2:8378664-8383374 FORWARD LENGTH=427
Length = 426
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 14/61 (22%)
Query: 44 KYYGAKATINVWAPKIEQPNEFSLSQLWILGGSF--------------GEDLNSIEAGWQ 89
K+YG + INVW P ++ NEFSLSQ+W+ GS+ L +IEAGWQ
Sbjct: 175 KFYGTQTLINVWKPFVQHRNEFSLSQIWMSAGSYRPYGSSKWTNKQDHSTQLETIEAGWQ 234
Query: 90 V 90
V
Sbjct: 235 V 235
>AT5G25960.1 | chr5:9062917-9065011 REVERSE LENGTH=353
Length = 352
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 33 LQHAIAYVQGDKYYGAKATINVWAPKIEQPNEFSLSQLWILGGSFGEDLNSIEAGWQV 90
+ A+ G + GA++ INVW P Q +++S +Q+W+LGG + SIEAGW V
Sbjct: 109 IPEAVLMALGYNFIGAQSDINVWNPPRVQASDYSSAQIWLLGG-LSDTFESIEAGWAV 165
>AT5G25950.1 | chr5:9057929-9059860 REVERSE LENGTH=433
Length = 432
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 42 GDKYYGAKATINVWAPKIEQPNEFSLSQLWILGGSFGEDLNSIEAGWQV 90
G + GA++ IN+W P + ++S +Q+W++GG E+ S+E GW V
Sbjct: 192 GFNFVGAQSDINIWNPPRVEATDYSTAQIWLVGG-LSENFESVEGGWMV 239
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.136 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,150,882
Number of extensions: 75736
Number of successful extensions: 239
Number of sequences better than 1.0e-05: 20
Number of HSP's gapped: 234
Number of HSP's successfully gapped: 20
Length of query: 102
Length of database: 11,106,569
Length adjustment: 72
Effective length of query: 30
Effective length of database: 9,132,617
Effective search space: 273978510
Effective search space used: 273978510
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 104 (44.7 bits)